Pairwise Alignments

Query, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 596 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  210 bits (535), Expect = 5e-59
 Identities = 109/250 (43%), Positives = 161/250 (64%), Gaps = 1/250 (0%)

Query: 6   LLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQGRIRF 65
           LL ++G++ S+ GVK   D+ F +  G I ALIGPNGAGKS+++N++ GV     G IRF
Sbjct: 334 LLVVQGVTKSYGGVKPAQDVSFRLQRGHIHALIGPNGAGKSTMINMLTGVIEPDAGVIRF 393

Query: 66  AGQQRRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTGRNLKRRSSWLEQALRIGRAP 125
            GQ       H     G+ RTFQN+ LF  +SVLDNV+ GR+ +  + +L   +    A 
Sbjct: 394 LGQNIVGQPAHTICCLGMGRTFQNLRLFADLSVLDNVMLGRHSRMSNGFLSSLVAWPTAG 453

Query: 126 GEDDRQRAAAERVIEFLRIQPWRDEIVGTLPYGLQKRIELARALAAEPRLLLLDEPMAGM 185
            ++   R  A ++++ + +        G+LPYGLQ+R+ELARALA EP+LLLLDEP AG+
Sbjct: 454 KQERATRERALQLLDLVDLGHLAHWPAGSLPYGLQRRVELARALATEPQLLLLDEPAAGL 513

Query: 186 NAEEKREMSRFIVEINREFGMTVVLIEHDIGVVMGISHHVVVLDYGRKIGDGSPEQVRRN 245
           N +E  E+   ++ I +  G++++++EH + +VM IS HV+VLDYG KI +G P +V+ N
Sbjct: 514 NPQETAELGELLLRIGK-CGVSILMVEHHMDLVMSISDHVIVLDYGIKIAEGKPAEVQAN 572

Query: 246 PDVIAAYLGV 255
           P V+ AYLGV
Sbjct: 573 PRVVEAYLGV 582