Pairwise Alignments

Query, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 299 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Azospirillum sp. SherDot2

 Score =  196 bits (497), Expect = 7e-55
 Identities = 120/269 (44%), Positives = 164/269 (60%), Gaps = 16/269 (5%)

Query: 1   MSNLPLLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQ 60
           ++  PLL +E +++ F G+ A +D+ F    GEI ALIGPNGAGK++L N + G Y    
Sbjct: 10  LTEKPLLSVEHLTMRFGGLVANNDVSFEARAGEITALIGPNGAGKTTLFNCVTGFYTPTV 69

Query: 61  GRIRF---AGQQ---RRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTGRNLK-RRSS 113
           GR+     AG++    R+     A   G+ARTFQNI LF GMSVL+N++  ++ K  R+S
Sbjct: 70  GRLTLRHPAGKEFLLERMPGYRIAQLAGVARTFQNIRLFSGMSVLENLIVAQHNKLMRAS 129

Query: 114 WLEQALRIGRAPGEDDRQRAAAERV---IEFLRIQPWRDEIVGTLPYGLQKRIELARALA 170
               A  +G  PG    +  A E     ++ +R+  + D   G LPYG Q+R+E+ARA+ 
Sbjct: 130 GFAIAGLLG-LPGFRKAEHEAVELAKYWLDRVRLTEFADWEAGNLPYGAQRRLEIARAMC 188

Query: 171 AEPRLLLLDEPMAGMNAEEKREMSR---FIVEINREFGMT--VVLIEHDIGVVMGISHHV 225
            EP LL LDEP AG+N  E  E++    FI ++    G    V+LIEHD+ VVM IS HV
Sbjct: 189 TEPVLLCLDEPAAGLNPRESGELAEILTFIRDVQTPQGHRTGVLLIEHDMSVVMRISDHV 248

Query: 226 VVLDYGRKIGDGSPEQVRRNPDVIAAYLG 254
           VVLDYGRKI DG+PE V+ +P VI AYLG
Sbjct: 249 VVLDYGRKISDGTPEHVKNDPAVIRAYLG 277