Pairwise Alignments

Query, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  186 bits (473), Expect = 4e-52
 Identities = 111/264 (42%), Positives = 157/264 (59%), Gaps = 20/264 (7%)

Query: 6   LLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQGRIRF 65
           +L++E +S+ F G+ AI+D  F    GEI ALIGPNGAGK+++ N I G Y+   G I  
Sbjct: 21  ILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITM 80

Query: 66  AGQQ------RRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTGRN--LKRRSSWLEQ 117
             Q        R+       +  +ARTFQNI LF G++VL+N+L  ++  L + S +   
Sbjct: 81  RQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTIL 140

Query: 118 ALRIGRAPGEDDRQRAAAERV------IEFLRIQPWRDEIVGTLPYGLQKRIELARALAA 171
            L      G    +RA A  +      +E   +    D+  G LPYG Q+R+E+ARA+  
Sbjct: 141 GLL-----GLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCT 195

Query: 172 EPRLLLLDEPMAGMNAEEKREMSRFIVEINREFGMTVVLIEHDIGVVMGISHHVVVLDYG 231
            P LL LDEP AG+N +E   ++  +  I R+ G +++LIEHD+ VVM IS HVVVL+YG
Sbjct: 196 GPELLCLDEPAAGLNPKESLALNTLLRSI-RDEGTSLLLIEHDMSVVMQISDHVVVLEYG 254

Query: 232 RKIGDGSPEQVRRNPDVIAAYLGV 255
           +KI DGSP+ V+ +P VIAAYLGV
Sbjct: 255 QKISDGSPDHVKNDPKVIAAYLGV 278