Pairwise Alignments

Query, 342 a.a., putative Ribose ABC transporter, periplasmic ribose-binding protein from Pseudomonas putida KT2440

Subject, 316 a.a., ABC-type sugar transport system, periplasmic component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 73/296 (24%), Positives = 122/296 (41%), Gaps = 11/296 (3%)

Query: 41  GAEASATVPSLKGKRIAISTVGTSIYFDSRAFKAQVEEVQRLGGTPITLDAGRNDKAMVT 100
           GA  S +    KGK   I +   + +F   A  A  +E + LG      D+  N      
Sbjct: 20  GACESNSATETKGKVAVIVSTLNNPWFVVLAETA-AKEAESLGYEVSIFDSQNNTALENN 78

Query: 101 QLQNLVTLKPDAVIHTLGTLSIIEPWFKRISAAGIPLFTI--EVPSQYAVNTISADNWST 158
             +N +T    A++              + S AGI +F +  EV S    + I +DN++ 
Sbjct: 79  HFENAITAGYQAILFNPTDAEGSVSNVTKASEAGIAVFCMDREVNSSLPTSQILSDNYAG 138

Query: 159 GLLLAKQLVADLRGKGRVLLFNGFYGVPSCGIRYDQLKLVSKFYPQIEFIQPELRDVIPN 218
            + L K  V  L   G  +   G  G  +   R      V   YP ++ +  +  D   N
Sbjct: 139 CVSLGKYFVDQLDKSGNYVEILGLVGDNNTWNRSKGFHSVVGHYPDLKMVAQQSADFDRN 198

Query: 219 TVQDARSQVAALLNKYPKGELDAIWAAWDLPQLGASQALIEAG-RNEVRTYGVDGTPEVL 277
              +    +  +       ++DA++   D   +GA QAL  AG  N+V  +G DG  +V+
Sbjct: 199 KAMEVMESILQVHR-----DIDAVFCGNDAMAMGAYQALKAAGLENQVMVFGFDGAADVV 253

Query: 278 ELLRQPGSPVAAVVAQQPALIGRTAVHNVARYLAGEHDLPPETFVETLLTTAGNVD 333
           + ++     +AA   Q P ++ +TA     +Y+ GE D   +  V+  L T  NV+
Sbjct: 254 DAVKD--GRIAATAMQFPKVMAKTAAQLADKYIQGERDFVKKLPVDVELVTLANVE 307