Pairwise Alignments

Query, 354 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 329 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  392 bits (1006), Expect = e-114
 Identities = 202/329 (61%), Positives = 242/329 (73%), Gaps = 26/329 (7%)

Query: 26  VGLPLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNVLTGYTGQTSVGAAGFMAV 85
           +GL  L+L AF+G+P LGNDYW +AILIPFL+LSLAGLGLN+LTGY GQ S+G+A FMAV
Sbjct: 27  LGLAALVLFAFIGVPLLGNDYWFSAILIPFLLLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 86  GAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFLEW 145
           GAFA Y   LRV  LPL  +L+ GGL+A LV ++FG+PS RIKGFYL+V+TLAAQFF+ W
Sbjct: 87  GAFAAYNFELRVAWLPLLASLLLGGLVAALVAVVFGLPSLRIKGFYLLVSTLAAQFFVPW 146

Query: 146 VFAKFPWFYNHASSGTISAPRLELFSHSLASPVGRYLLTLSCVVLLTWVAVNLVRSQVGR 205
              +F WF N ++SG ISA                          L W+  NLVRS++GR
Sbjct: 147 ALTRFSWFSNDSASGVISA--------------------------LFWLGANLVRSELGR 180

Query: 206 NWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAYLGTSSAGSFDINRSF 265
           NWMA+RDMDTAA+VIGIP+ + K LAFA+S FYLG+AG+LWAF YLGT     FD+NRSF
Sbjct: 181 NWMAVRDMDTAAAVIGIPLLKTKLLAFAISGFYLGVAGSLWAFTYLGTVEPHGFDLNRSF 240

Query: 266 QILFIIIIGGMGSIAGNFIGAAFISLTPILLSHAGQWLFGGNVDAGQLQNLQKILFGCLI 325
           QILFIIIIGG+GSI GNF+GAAFI L P+LLS+    L  G +DAGQ++NLQKI FG LI
Sbjct: 241 QILFIIIIGGLGSILGNFLGAAFIVLFPVLLSNLAGLLPTGLIDAGQIENLQKIAFGTLI 300

Query: 326 IWFLIKEPEGLVRLLGDLRERIRVWPLRF 354
           I FLIKEPEGL RL    RER R WPLR+
Sbjct: 301 IIFLIKEPEGLARLWQRFRERARRWPLRY 329