Pairwise Alignments

Query, 354 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 8e-30
 Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 27/304 (8%)

Query: 13  DEAPLTLVRRRWPVGLPLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNVLTGYT 72
           ++ PL + + R P  L L++  + V LP L     L   +   L+ ++A L  N+L GYT
Sbjct: 3   EKNPLPVAKGRAPALLSLVV-ASLVALPLLLPSATLATEI---LIFAMAALACNLLLGYT 58

Query: 73  GQTSVGAAGFMAVGAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYL 132
           G  S G   F  VGA+    L++ +    +  AL+G  +    + LL G  + R  G Y 
Sbjct: 59  GLLSFGQGIFFGVGAYGAALLMIHLQW-GMFAALLGAAVFGAFLALLVGALAIRRTGIYF 117

Query: 133 MVTTLAAQFFLEWVFAKFPWFYNHASSG---------TISAPRLELFSH---SLASPVGR 180
           ++ TLA        F++  +F  +  SG          +  P +E+  H    LA P   
Sbjct: 118 VMLTLA--------FSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHF 169

Query: 181 YLLTLSCVVLLTWVAVNLVRSQVGRNWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLG 240
           Y+      +L+   A+ ++RS  G   +AIR+ +T A+ IG     +K L F +S    G
Sbjct: 170 YVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITG 229

Query: 241 IAGALWAFAYLGTSSAGSFDINRSFQILFIIIIGGMGSIAGNFIGAAFISLTPILLSHA- 299
           IAGAL+A   L  +   + D+  S  IL + I+GG GS+ G+ +GA  I L   +LS   
Sbjct: 230 IAGALYAM-LLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELW 288

Query: 300 GQWL 303
            +WL
Sbjct: 289 PRWL 292