Pairwise Alignments

Query, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 297 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  182 bits (462), Expect = 8e-51
 Identities = 109/292 (37%), Positives = 166/292 (56%), Gaps = 4/292 (1%)

Query: 5   LETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAALT-FVSLHEQGLPFALA 63
           L+ +I GL+ GTLY +V + FVLIYKAS V NFAQG  LL  A T +  L    +PF   
Sbjct: 7   LQLIINGLIIGTLYGVVGMCFVLIYKASQVVNFAQGEFLLIGAWTCWWLLTAWNIPFFWG 66

Query: 64  LALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQVRALDLG 123
             + V  M+V  + ++ +VLRPL+    I++ M T+GLS   + L + + G   +     
Sbjct: 67  FLIAVCFMMVFGIAVQMIVLRPLIGEPIISVIMVTIGLSIFFQALMKWMFGTFAQPFPPI 126

Query: 124 IEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALSLGIN 183
                + +  L +    L+++GVS  ++A  A  F  +R+G+A+RA A   + A SLGI+
Sbjct: 127 FPVAQVNILGLQVQTAYLMSTGVSLAIMAGFAWFFKYSRLGLAMRATAFSQQVAQSLGIS 186

Query: 184 LNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLSLVVLKALPVLIIGGFTSIGGAIVGGL 243
           + +++ + W ++  V  VAG++ G   GV  +LS   +K  P +I+GG  S+ GA+VGGL
Sbjct: 187 VRQVFALSWGISAAVSAVAGVVVGIVNGVSSALSYFGIKVFPAVILGGLDSVFGAVVGGL 246

Query: 244 IVGAAENLAEAYIGP--LIGGGITPWFAYFLALIFLYIRPAGLFGDRAIERV 293
           IVG  ENL + Y+    L  G +     ++  +I L I+P GLFG R IERV
Sbjct: 247 IVGLLENLGQ-YVDSQYLKWGNLYEIIPFYALIIILMIKPYGLFGTRDIERV 297