Pairwise Alignments

Query, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  130 bits (327), Expect = 3e-35
 Identities = 88/289 (30%), Positives = 154/289 (53%), Gaps = 8/289 (2%)

Query: 1   MNFFLETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAALTFVSLHEQ-GL- 58
           M   ++ ++ G+L G++Y+++++G  LI+    V NFA G  L+        L  + GL 
Sbjct: 1   MEVLIQLVLNGILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAAYLLAAKFGLH 60

Query: 59  PFALALALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQVR 118
           P+A A+ + +L+  +GA  ++R +++PL+   +     AT+GLS  +  LA  + GA + 
Sbjct: 61  PYAAAVPIVILLFAIGAA-VQRFLIQPLLGAEEHIQIFATVGLSTALVNLALLVFGADLY 119

Query: 119 ALDLGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAAL 178
           ++        + VG   + +  LV    +  LVA L L    T +G A+RA A +  AAL
Sbjct: 120 SIPPSAAQGTVMVGGFSLVKGQLVMFVCALALVAGLHLFMQSTALGRAIRATAQNRTAAL 179

Query: 179 SLGINLNRIWQIVWAV-AGMVGLVAGLLWGARQGVQFSLSLVVLKALPVLIIGGFTSIGG 237
            +G+ +++I+ I + + A  VGL + L+           +  VL A  V+++GG  S+ G
Sbjct: 180 LMGVKVDQIYVIAFGIGAACVGLASALVMPLYPVTPTIGTYFVLTAFVVVVLGGMRSMYG 239

Query: 238 AIVGGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFG 286
           A  G +I+G  ++L+  YI P +   +  +FA FLA+  L  +P GLFG
Sbjct: 240 AFFGAMIIGLVDSLSGYYIAPDLKEVV--YFAIFLAI--LIFKPTGLFG 284