Pairwise Alignments

Query, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 293 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  137 bits (345), Expect = 3e-37
 Identities = 96/289 (33%), Positives = 156/289 (53%), Gaps = 14/289 (4%)

Query: 6   ETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLL---FAALTFVSLHEQGLPFAL 62
           + L+  L  G +Y+L A+GF LI+   GV N + GA+ +   +AA  F+ +   G+P  +
Sbjct: 4   QQLVNALSLGCVYALFALGFTLIFGVLGVINLSHGAVFMVGAYAAAEFMRV--SGMPLWV 61

Query: 63  ALALTVLVMIVGALLIERLVLRPLVNRSQITLF--MATLGLSFIIEGLAQGLMGAQVRAL 120
            L        V   L++ LVL+PL  R+   L   +AT+G++ I+    QG+ GA+    
Sbjct: 62  GLPFAFAFCGVLGFLVDVLVLKPLRKRNAPHLIPMIATIGVAIILNNGIQGIFGAENLRF 121

Query: 121 DLG-IEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALS 179
             G I D  L    + ++  +L     S +L+ VL L   +T++G ALRA+A+  +AA  
Sbjct: 122 PPGTIPDDALVFAGIHVTVLELGIVLASFVLMGVLMLSLQRTQLGRALRAIAESPKAAYL 181

Query: 180 LGINLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSL--SLVVLKALPVLIIGGFTSIGG 237
           +G+N+  ++ +   VA  +G VAG+L G      F L    ++ K + V+I+GG   I G
Sbjct: 182 VGVNVEGLFYLTSFVAAGLGGVAGVLIGLYSNALFPLMGQPMLEKGIAVIILGGMGDIRG 241

Query: 238 AIVGGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFG 286
           A++GGL +G AE L+ AY+G  +   +    A+ L  + L +RP GLFG
Sbjct: 242 ALLGGLFLGFAEVLSVAYVGSNMRDAV----AFGLLFLVLLVRPKGLFG 286