Pairwise Alignments

Query, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  175 bits (444), Expect = 1e-48
 Identities = 100/292 (34%), Positives = 170/292 (58%), Gaps = 7/292 (2%)

Query: 5   LETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAALT-FVSLHEQGLPFALA 63
           L+ LI G+  G +Y L+A+GFVLIYKA+   +FAQG +++  A     ++   G PF LA
Sbjct: 4   LQLLISGVAQGCIYGLIALGFVLIYKATETVSFAQGDLMMVGAFGGLAAMTMLGFPFWLA 63

Query: 64  LALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGL--MGAQVRALD 121
           +   ++ M +   ++ER+V+RP++ +   ++ M T+G+ + + GL   L  +G     L 
Sbjct: 64  VPAAIVGMGLFGAVLERVVIRPILGQPAFSIVMLTIGVGYTLRGLITMLPNIGTDTHTLP 123

Query: 122 LGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALSLG 181
           +   D  L +G+L++S   +V  G +A+L A L  +F  +++G+A++A + +  AA  +G
Sbjct: 124 VPYADQVLRLGQLVVSAEQIVVIGSTAVLCAGLFAMFRYSKLGIAMQASSQNQLAAYYMG 183

Query: 182 INLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLSLVVLKALPVLIIGGFTSIGGAIVG 241
           I + R+  +VW +A  V  VAGLL      V  ++  + LKA P  ++GGF S+ GAIVG
Sbjct: 184 IPVKRLNGLVWGLAAAVAAVAGLLLAPITFVHANMGFIGLKAFPAAVVGGFGSLPGAIVG 243

Query: 242 GLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFGDRAIERV 293
           GLI+G    + EA+ G  +  G      Y + L+ L ++P GLFG++  ++V
Sbjct: 244 GLIIG----IVEAFSGFYLPEGFKDVAPYIVVLLMLVLKPNGLFGEKLRKKV 291