Pairwise Alignments

Query, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Azospirillum sp. SherDot2

 Score =  138 bits (347), Expect = 2e-37
 Identities = 87/293 (29%), Positives = 145/293 (49%), Gaps = 11/293 (3%)

Query: 5   LETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAALTFVSLHEQGLPFALAL 64
           L+ L+ GL  G +Y+L  +GF +IY AS V NFAQG  ++   +   +L   G+P  LA+
Sbjct: 6   LQYLLSGLTIGAIYALAGLGFSIIYNASHVINFAQGEFIMIGGMASATLTASGVPLPLAI 65

Query: 65  ALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQVRALDLGI 124
            +     ++  +L+ +  +    N S +TL + T+G S  + G+A+ + G   + LD   
Sbjct: 66  MIGCGGAMLVGVLVAKFAVERARNASTVTLIIITIGASIFLRGVAELVWGKDFKRLDAFS 125

Query: 125 EDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALSLGINL 184
            + P+ +    +    L   G + +L+  + L F +T  G A+ A + +  AA  +GI++
Sbjct: 126 GETPIQIMGASMQPQSLWVVGTAGVLIVAIGLFFARTLTGKAILATSHNRLAAQLVGIDV 185

Query: 185 NRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLS----LVVLKALPVLIIGGFTSIGGAIV 240
            R+    +A++  +G V G +      + FS +    ++ LK     ++GG     GA+ 
Sbjct: 186 KRVVLASFALSAALGAVGGAVVAP---ITFSYTEMGIMLGLKGFTAAVLGGLGHGPGAVA 242

Query: 241 GGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFGDRAIERV 293
           GGLIVG AE L   YI       +    A+ + L  L   P GLFG R  ERV
Sbjct: 243 GGLIVGIAEALGAGYISSAYKDAV----AFVIILAVLLFMPNGLFGKRGTERV 291