Pairwise Alignments

Query, 266 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 263 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  196 bits (497), Expect = 6e-55
 Identities = 112/254 (44%), Positives = 157/254 (61%), Gaps = 1/254 (0%)

Query: 9   RGMSALLEVRNVSLSFKGVKAISDLSFSVRRGEICALIGPNGAGKSSLLNILNGVYRADA 68
           R    LLEV  ++  F GV A+ DLSF V+ GEI A+IGPNGAGKS+L N++ GV R   
Sbjct: 5   RSTGDLLEVEGLTCRFAGVTAVDDLSFRVKAGEIKAVIGPNGAGKSTLFNMIAGVTRPTD 64

Query: 69  GQLFFATEPLRRPHPLQAARLGIGRTFQNNALFKKMSVLDNLLTGLSRFQRSYFLEQALG 128
           G + F    + R      AR GI RTFQN  +F++MSVL+N++ G     R+  L   L 
Sbjct: 65  GAIKFDGARVDRLPTHARARRGIARTFQNLQIFREMSVLENVMVGRHLRGRATTLSALLH 124

Query: 129 LPRARREARAFAERAEQVLAFLELQPWRDVAVGSLAYGLQKRVELGRALIAQPTLLLLDE 188
           +P    E RA    A  +L    L     +  GSLA+G  K +EL RAL ++P LLLLDE
Sbjct: 125 IPSVGAEERAMEATAMALLERFGLAAKAGLPAGSLAFGQMKVLELARALASEPRLLLLDE 184

Query: 189 PMAGMNAEEKQDMSRFIADINRDLGTTVILIEHDIQVVMGLSSHVVVLDYGRKVGDGTPA 248
           P AG+   E   M+  I D+NRD G TV+L+EH++++VM LS  ++VL+ GR++ +GT  
Sbjct: 185 PAAGLPHAEADKMAETIRDLNRD-GMTVLLVEHNMRMVMSLSHDILVLNNGRRIAEGTAE 243

Query: 249 EVQANPDVIAAYLG 262
           +V+ +P+V++AYLG
Sbjct: 244 DVRRHPEVLSAYLG 257