Pairwise Alignments

Query, 266 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 274 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  203 bits (516), Expect = 4e-57
 Identities = 110/255 (43%), Positives = 155/255 (60%), Gaps = 5/255 (1%)

Query: 12  SALLEVRNVSLSFKGVKAISDLSFSVRRGEICALIGPNGAGKSSLLNILNGVYRADAGQL 71
           SA+L V +V + F G+ AI+DL F V  GEI +LIGPNGAGK++  NI+ G  +   G++
Sbjct: 7   SAILNVEHVGMKFGGLTAIADLHFDVHEGEILSLIGPNGAGKTTAFNIMTGFLKPTQGRV 66

Query: 72  FFATEPLRRPHPLQAARLGIGRTFQNNALFKKMSVLDNLLTGLSRF----QRSYFLEQAL 127
            F    L +  P + ARLG+ RTFQ  ++F   SV DN+L GL RF    + +  L++  
Sbjct: 67  LFRGRDLSQTRPNEIARLGLARTFQRTSVFADDSVRDNVLIGLHRFGDDTRATALLDRLF 126

Query: 128 GLPRARREARAFAERAEQVLAFLELQPWRDVAVGSLAYGLQKRVELGRALIAQPTLLLLD 187
             P ARR   A  ERAE ++  + L        GSL+YG Q+ V    AL  +P +LLLD
Sbjct: 127 PTPAARRAENAVRERAEAIIDMVGLSARAGDKAGSLSYGEQRLVGFALALAVEPKMLLLD 186

Query: 188 EPMAGMNAEEKQDMSRFIADINRDLGTTVILIEHDIQVVMGLSSHVVVLDYGRKVGDGTP 247
           EP++GMNA E Q   R I  + RD G T++L+EHD+ +VM +S  +V L+YGR + +G P
Sbjct: 187 EPVSGMNASETQGFVRLIRKV-RDEGVTILLVEHDMPMVMEVSDRIVCLNYGRLIAEGPP 245

Query: 248 AEVQANPDVIAAYLG 262
             ++ +P VI AYLG
Sbjct: 246 EAIRTDPKVIEAYLG 260