Pairwise Alignments

Query, 489 a.a., putative Long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  107 bits (266), Expect = 2e-27
 Identities = 109/420 (25%), Positives = 169/420 (40%), Gaps = 74/420 (17%)

Query: 134 VAPALPEGTAKITYTSGSTGTPKGVCLSAETLLRVAHELEAASRPTAPQRYLAVLPLGVL 193
           VA   PE  A + YTSG+TG PKG   S   L+  A               +  LPL  +
Sbjct: 191 VAACRPEDLAILVYTSGTTGKPKGAMHSHAGLVYTARGYNTLIAQDEKDERMCFLPLCHI 250

Query: 194 LENLG-VYAALMAGACV-----------------------------QLYPQQQLGM---G 220
            E +G  Y A+  G+ +                             + Y    + +   G
Sbjct: 251 AERMGGEYFAMYTGSILNFVENPETVPENVREIAPTVFTAVPRVWEKFYSGVMIALKEAG 310

Query: 221 GASQVDFKRLLGAIALSGAQSLILVP---------QLLMGLVTAIERGLMRVGPLRLVAV 271
              Q  +K  +G      A+ L   P         +L   L     R L+ +   R +  
Sbjct: 311 PLQQAAYKWSIGVGEAIAAKVLAGEPVGAGLKFKFRLARLLALDNARKLIGIHRSRFLVT 370

Query: 272 GGARVSPSLLARAEAVGLPVFEGYGLSE-CASVVALNRTGAVRPGSVGKPLPHVQVRI-A 329
           G A +SP L+    A+G+P+ E +G++E C +  A+  T  ++PGS+G    + +VRI  
Sbjct: 371 GAAPISPELVKWYLALGVPMLEVWGMTESCGASTAVPAT-RIKPGSIGPATGYNEVRIDP 429

Query: 330 EDGEVLVAG-STLLGYLGEPPVTGQ------WWATGDVGHLDEDGYLYLDGRKKHQFITS 382
             GE+LV G +  +GYL  P  T +      W  TGDVG +DEDGY  +  R K   IT+
Sbjct: 430 ATGEILVRGPNVFMGYLNLPEKTAETIDPEGWLHTGDVGVMDEDGYFRITDRMKDIIITA 489

Query: 383 FGRNVNPEWVEAELSQSGVIAQAFVHGEALPRNLALLWPLDPGISD-------------- 428
            G+NV P  +E EL  S  I  A V G+  P    ++      +                
Sbjct: 490 GGKNVTPSELENELKFSLYITDAVVIGDKKPYLTVIVMIDQENVEKFAQDHDVPFSNYES 549

Query: 429 --------EAIEQAVQQCNARLPDYARVHAWRRLPVPLSTLDETLTANGRPRREAILQRY 480
                   + I+  + + NA+     ++  +  L   LS  DE LT   + +R+ +  +Y
Sbjct: 550 LTRTKEVLDLIQGEIDRVNAKFARVEQIKKFFLLETQLSAEDEELTPTMKLKRKLVQTKY 609