Pairwise Alignments

Query, 489 a.a., putative Long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 506 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 2e-26
 Identities = 115/443 (25%), Positives = 179/443 (40%), Gaps = 50/443 (11%)

Query: 6   TAFQALLRQHAVEHPDAVAVQGD--AQRYTYRQLLNEVESRASCLR---SQPPGTFAVVL 60
           T   AL+ Q A   P AV  +     Q  TY +L       A+ L    ++P  T +VV+
Sbjct: 6   TTVHALIEQQAQRQPHAVYARATETGQHLTYGELARGCRRVAAVLHGAGARPGDTISVVM 65

Query: 61  DNGPEALFWDLAALFAERASVTVPPFFSATQFQHCLQQSGVTAVVCEAQWAEQLIALGFA 120
            NG + L   L A+        V       Q ++ L  +    V    +W  ++  +  A
Sbjct: 66  PNGLQTLRLLLGAMHGGLRVNPVNLLSQPEQMRYVLAHADCRVVCVAPEWEARVREIVQA 125

Query: 121 RQAPAGVWQRDS--------------FVAPALPEGTAKITYTSGSTGTPKGVCLSAETLL 166
              P  V   D                V P LP+  A + YTSG+TG PKGV LS   L 
Sbjct: 126 FDRPVTVLVVDPEAEVLPGETEAPAVAVPPPLPDAVALLMYTSGTTGMPKGVMLSQRNLA 185

Query: 167 RVAHELEAASRPTAPQRYLAVLPL-GVLLENLGVYAALMAGACVQLYPQQQLGMGGASQV 225
             A+ + A     +  R LAVLPL  +    + + A L  G  + + P+   G       
Sbjct: 186 ANAYAISAEHGLRSSDRVLAVLPLYHINAFTVTMLAPLAHGGSLAMPPKFSAG------- 238

Query: 226 DFKRLLGAIALSGAQSLILVPQLLMGLVTAIERGLMRVGPLRLVAVGGARVSPS-LLARA 284
              R       +    + LVP ++  L+   +  L +   +R      A + P  L A  
Sbjct: 239 ---RFWEQATQTQCSWINLVPTMISYLLEGPKPPLAQTLAIRFCRSASAALPPEHLRAFE 295

Query: 285 EAVGLPVFEGYGLSECASVVALN--RTGAVRPGSVGKP------LPHVQVRIAED---GE 333
           +  G+ + E  GL+E A+    N     A + GSVG+       +   ++    D   GE
Sbjct: 296 QKFGIGIVETMGLTETAAPSFSNPMDPAARKLGSVGRASGCMAGVVDAKLSAVPDGVTGE 355

Query: 334 VLVAG-STLLGYLGEPPVT------GQWWATGDVGHLDEDGYLYLDGRKKHQFITSFGRN 386
           +++ G + +LGY      T        W  TGD+GH DEDG+ ++ GR K + I   G N
Sbjct: 356 LVIRGPNVMLGYYKNEEATRASFTPDGWLRTGDLGHRDEDGFFFVTGRIK-ELIIKGGEN 414

Query: 387 VNPEWVEAELSQSGVIAQAFVHG 409
           + P  ++  L +   + +A   G
Sbjct: 415 IAPREIDEALMRHPAVREAAAVG 437