Pairwise Alignments

Query, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

Subject, 259 a.a., Catabolite repression control protein from Pseudomonas putida KT2440

 Score = 77.4 bits (189), Expect = 3e-19
 Identities = 73/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)

Query: 4   LKIATFNINGIRSRLP-ALLAWLEREQPDIACLQELKAADQQFPRAELEAAGY--GSLHH 60
           ++I + N+NGI++     LL+WL+ +  D+ CLQ+ +A+  +      +  GY   +   
Sbjct: 1   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 61  GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAAAHGVLVACLYLP---NGNPLP 117
             P+  GVA+  R   P  V  GL     D   RYL+A    V +A L LP   NG+   
Sbjct: 61  EVPAQGGVALYSR-MQPKAVITGLGFETADRYGRYLQADFDKVSIASLLLPSGMNGDEDL 119

Query: 118 GPKFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPR-SWLKDALLQPES 176
             KF     + + L +  R  +E     +  G F V    +DI N R S      L PE 
Sbjct: 120 NQKFKLMDDFAKYLDKQRRKRRE----YIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 177 RACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRA 236
                   + G++DA+R +  +   Y++W         N G R D+ +    L P L+R 
Sbjct: 176 AWMDAITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQI----LTPGLRRF 231

Query: 237 GVDAWVRNQAKASDHAPVWIE 257
             +A +  Q + S HAP+ ++
Sbjct: 232 VRNARLPRQPRFSQHAPLIVD 252