Pairwise Alignments

Query, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

Subject, 263 a.a., exodeoxyribonuclease III from Magnetospirillum magneticum AMB-1

 Score =  130 bits (328), Expect = 2e-35
 Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 14/264 (5%)

Query: 4   LKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSL-HHGQ 62
           +++ T+NIN IR R+  L        PDI CLQE+K  D  FP       G+G +  HG 
Sbjct: 1   MRLVTWNINSIRLRIDLLRQVASVMNPDIICLQEIKVDDPLFPLDACREMGFGHVAFHGM 60

Query: 63  PSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAAAHGVLVACLYLPNGNPLPGP--- 119
             +NGVAIL R   P+   R L     D +   +    +GV V CLY+P G  +P P   
Sbjct: 61  KGYNGVAILSR--LPIAEARPLSRCGRDDRRHLMARLENGVEVHCLYIPAGGDIPDPETN 118

Query: 120 -KFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQP---E 175
            KF +KL +   +   A +        +LAGDFN+ P + D+++ +  LK     P   E
Sbjct: 119 DKFAHKLDFVREITAWAAAEFTPDSRAILAGDFNIAPLEADVWSHKQLLKVVSHTPVEVE 178

Query: 176 SRACYQRLLDQGWLDAIRHLY-PDERVYTFWDYFRNHWARN-AGLRIDHLLLNRELAPYL 233
               +Q  +   ++DA+RH   P+E+++T+W Y    W +N  G R+DH+ +   L P L
Sbjct: 179 LLNAFQASVP--FVDAMRHFVPPEEKLFTWWSYRSPDWQKNDRGRRLDHVWVTPALVPSL 236

Query: 234 KRAGVDAWVRNQAKASDHAPVWIE 257
           +   V    R+  + SDH PV ++
Sbjct: 237 RGMLVAREARSWEQPSDHVPVMVD 260