Pairwise Alignments

Query, 394 a.a., Peptidase, M20/M25/M40 family from Pseudomonas putida KT2440

Subject, 397 a.a., putative N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  200 bits (509), Expect = 5e-56
 Identities = 131/376 (34%), Positives = 204/376 (54%), Gaps = 8/376 (2%)

Query: 12  SAAELDEFVMLRRQIHAAPEIGGDTPDTSALVADKLQALGYEVHRNVGGHGVVGVLKVGD 71
           +A +L++ + +RR IHA PE+  +   T A V   LQ +G    +     G+V +++ G 
Sbjct: 10  AADQLNQTIAIRRHIHAHPELSFEEHQTCAFVEKHLQEIGITNIQRKANTGLVALIE-GK 68

Query: 72  SP--RSIGLRADMDALPMGEKNAFAHASKIPGRMHACGHDGHTAILLAAAAQLAATR-QF 128
           +P  + I LRADMDALP+ E+N   + S   G MHACGHD HT+ LL AA+ L A + QF
Sbjct: 69  NPSKKVIALRADMDALPIVEQNDVPYKSNKEGVMHACGHDVHTSSLLGAASILHAVKDQF 128

Query: 129 NGTLNVIFQPDEEGL-AGAKAMIDDGLFERFPCDSVYALHNMPGLPVGTCVVQAGPTMAS 187
            GT+ +IFQP EE +  GA  MI D   E      +   H MP +  G    + G  MAS
Sbjct: 129 EGTVKLIFQPGEEKIPGGASLMIKDKALENPRPSGIVGQHVMPLIDAGKVGFRKGMYMAS 188

Query: 188 SERVSIRITGKGGHGAMPELSVDPVMALNSLISGIQTIKSRNLSVEDYAVISIGMIQAGT 247
           ++ + +++ GKGGHGAMPE  VDPV+  + +I  +Q + SRN S +  +V+S G I+A  
Sbjct: 189 ADELYLKVIGKGGHGAMPETLVDPVLIASHIIVALQQVISRNASPKVPSVLSFGRIEALG 248

Query: 248 VYNIIPDEACMLLSVRTDTAQTQQKINSRIDALAKGHAESYGVEIDVQFTQLAPALCNSD 307
             N+IP+E  +  + RT     + + + ++  +A+G AE  G  +D +  +  P L N+ 
Sbjct: 249 ATNVIPNEVNIQGTFRTLDETWRAEAHQKMVKIAEGIAEGMGGSVDFEVRKGYPFLQNAP 308

Query: 308 HESTLLRDSLRPLFADGALLDKMPKKVMGTEDFAYMLQARPGCYFMLGNGTGEFHGCS-V 366
             +     + +    +  + D      M  EDF+Y  Q   GC++ LG    E    S V
Sbjct: 309 ELTDRAYKAAQAYLGEENVEDL--DIWMAAEDFSYYTQEMDGCFYRLGIRNEEKGITSGV 366

Query: 367 HNPHYDFNDALVKIGA 382
           H P +D +++ +++GA
Sbjct: 367 HTPTFDIDESALEVGA 382