Pairwise Alignments

Query, 556 a.a., putative sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 660 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  197 bits (501), Expect = 1e-54
 Identities = 146/398 (36%), Positives = 203/398 (51%), Gaps = 7/398 (1%)

Query: 162 QRLQQLNDELEQRVAARTDELLEARDAAEAANRSKDKYLAAASHDLLQPLNAARLLISTL 221
           +RLQ      E+RV   T   L+    AE A  S+ ++LAAASHDL QPL+A  L I  L
Sbjct: 265 ERLQHNRQVSEERVREATAVALQRMAEAEQAALSRARFLAAASHDLRQPLHAMGLFIDGL 324

Query: 222 RERPLPEAEHVLVERTHQALEGAEDLLTDLLDISRLDQAAVKPDVAVYRLDELFAPLVSE 281
                P A+   V R  ++ E    LL DLL+ISRLD   + P +    L  LF  + ++
Sbjct: 325 LPGATP-AQRPAVLRLQESTEFMGVLLDDLLEISRLDAQVLTPAITKVSLAALFDQIDAQ 383

Query: 282 FSPVAEAAGLKLHARIADYAISTDLRLLTRILRNFLSNACRYTEEG-RILLGARRRGGHL 340
            +  A  A ++LH      A+ TD  +L RI+ N +SNA R+  +G  +L+ ARR    +
Sbjct: 384 HAATAAEARVRLHWSDRGLAVRTDAAMLRRIVGNLVSNALRHAPDGGTVLVAARRCAAGV 443

Query: 341 RLEVWDTGRGIAQDRLQDIFLEFNQLDVGRAADRKGVGLGLAIVERIAKILGYRIEVRSW 400
           R+EV D G GIA      IF EF Q+       R+G GLGLAI  RIA +LG RI VRS 
Sbjct: 444 RIEVRDNGVGIAPIHQGRIFEEFYQVANTERDRRRGFGLGLAICARIATLLGTRITVRSA 503

Query: 401 LGRGSVFSIEVPLGKEVPLAVHQAVPLPSVGDPLPGRRLLVLDNEVSILESMGALLGQWG 460
           L  GS F+  +P  +       Q  P      PL G R LV+D++ +IL+    LL QWG
Sbjct: 504 LQAGSTFAFTLPAARAADAV--QPEPPQFAPTPLAGLRCLVVDDDPAILDGSRTLLAQWG 561

Query: 461 CEVVTATDREGALLALQGRAP--ELILADYHLDHGVVGCEVVRYLREHFATAIPAVIITA 518
           C+    T    A+  L G     + +L D  L     G +V+   +     A+ AV+++ 
Sbjct: 562 CQAECVTTGAEAIARLGGGDVHYDAVLCDLQLAGDDDGVDVLDAAKRLQPDAL-AVLVSG 620

Query: 519 DRSDQCRRGLQKLGAPLLNKPVKPGKLRAVLSQLLLVH 556
               +  + L++ G  LL KPV P KLRA+L+    VH
Sbjct: 621 ATGPEVLQRLRQGGVMLLTKPVAPAKLRALLTTRRQVH 658