Pairwise Alignments

Query, 556 a.a., putative sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 630 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  208 bits (529), Expect = 6e-58
 Identities = 140/407 (34%), Positives = 215/407 (52%), Gaps = 24/407 (5%)

Query: 160 AQQRLQQLNDELEQRVAARTDELLEARDAAEAANRSKDKYLAAASHDLLQPLNAARLLIS 219
           A + L + +  L+ R+   T EL       E A+++K + LAAASHDL QPL+A  L   
Sbjct: 217 AARALAESHRLLQSRINEATAELARKNQQLEVASQAKTRLLAAASHDLRQPLHALTLFSD 276

Query: 220 TLRERPLPEAEHVLVERTHQALEGAEDLLTDLLDISRLDQAAVKPDVAVYRLDELFAPLV 279
            L        +   +    + ++  + L ++LL++S+LD   ++P  A + LD LF  + 
Sbjct: 277 GLANGETDPLKLQRIGHIRECVDSLDRLFSELLNLSQLDAGVLQPQWADFPLDRLFDEIS 336

Query: 280 SEFSPVAEAAGLKLHARIADYAISTDLRLLTRILRNFLSNACRYTEEGRILLGARRRGGH 339
             F PVAE  GL+L  R  D  +  D  +L+RIL N +SN+ R+T EG +L+GARRRG  
Sbjct: 337 RNFRPVAEQQGLRLVVRKTDVWVRCDYVMLSRILNNLVSNSLRHTIEGGVLIGARRRGKG 396

Query: 340 LRLEVWDTGRGIAQDRLQDIFLEFNQLD-VGRAADR--KGVGLGLAIVERIAKILGYRIE 396
           +R++V DTG GIA      +F EF Q++  GR A R  +G+GLGLA V+R+A +L  R+E
Sbjct: 397 VRIDVVDTGVGIAPQHQARVFEEFYQVEPTGRQAARGARGMGLGLATVQRLADLLNTRVE 456

Query: 397 VRSWLGRGSVFSIEVPLGKEVPLAVHQAVPLPSVGDPLPG---------RRLLVLDNEVS 447
           + S L +G+   +   L +  P     A+P P++   L G          R+LV+D+E +
Sbjct: 457 LSSKLHKGTCVRV---LVRSAP----AALPAPALSAALAGIEEEESLANVRILVIDDERT 509

Query: 448 ILESMGALLGQWGCEVVTATDREGALLALQGRA--PELILADYHLDHGVVGCEVVRYLRE 505
           ILE +  +L  WG EV+ A  R  AL    G A  P+++++D  L  G  G +V+  L  
Sbjct: 510 ILEGLAVVLANWGAEVLPAQTRAEALALADGWAQPPDVVISDLLLQGGDNGLDVIAALER 569

Query: 506 H---FATAIPAVIITADRSDQCRRGLQKLGAPLLNKPVKPGKLRAVL 549
           H          +++T +      R +   G  +L KPV P  LR  +
Sbjct: 570 HPHGIGPGTARLLVTGETKPDRLREVANAGITVLYKPVSPRVLRQAI 616