Pairwise Alignments

Query, 595 a.a., quinoprotein ethanol dehydrogenase from Pseudomonas putida KT2440

Subject, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dadantii 3937

 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 20/169 (11%)

Query: 55  RYSPLDLLNVNNVKELRPVWAFSFG-GEKQRGQQAQPLIKDGVMYLTGSYSRVFAVDART 113
           + SPL    V N      VW+ S G G  +      P  +D  +Y    +  V A+D  +
Sbjct: 31  KMSPLP--QVTNQFTPTKVWSRSVGDGTGEFYSNLHPTWQDSRVYAADRHGTVKALDLNS 88

Query: 114 GKKLWQYDAR----LPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSK 169
           G++ W+ D      L    RP   +++ GVA+ GN V+ G+  A+L ALN D G + W  
Sbjct: 89  GEEKWRVDLAEKTGLLSSNRPA--LLSGGVAVSGNHVYVGSERAQLFALNADDGALQWQT 146

Query: 170 KVADHKEGYSISAAPMIVNGKLITGVAGGEFGVVGKIQAYNPENGELLW 218
           KVA       + ++P++ +G +I   +       G +QA +  +G + W
Sbjct: 147 KVAG-----EVLSSPVVSDGVVIIHTSN------GMLQALSESDGTIKW 184



 Score = 42.0 bits (97), Expect = 5e-08
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 10/82 (12%)

Query: 467 DYIGVLRAIDPVSGKEVWR----------HKNYAPLWGGVLTTKGNLVFTGTPEGFLQAF 516
           D  G ++A+D  SG+E WR            N   L  G +   GN V+ G+    L A 
Sbjct: 76  DRHGTVKALDLNSGEEKWRVDLAEKTGLLSSNRPALLSGGVAVSGNHVYVGSERAQLFAL 135

Query: 517 NAKTGDKVWEFQTGSGVLGSPV 538
           NA  G   W+ +    VL SPV
Sbjct: 136 NADDGALQWQTKVAGEVLSSPV 157



 Score = 41.2 bits (95), Expect = 8e-08
 Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 15/109 (13%)

Query: 90  PLIKDGVMYLTGSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGNLVFFG 149
           P++   V+Y  G    + A+D R+G+  W+ +    +D             + G+ ++  
Sbjct: 252 PVVAGNVVYALGYNGNLTALDLRSGQITWKREIGSVNDF-----------IVDGDRIYLV 300

Query: 150 TLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPMIVNGKLITGVAGG 198
             D ++ ALN + G V+W +    H+       AP + NG L+ G A G
Sbjct: 301 DQDDRITALNTNGGVVIWRQGDLLHRN----LTAPALYNGYLVVGDAEG 345



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 24/137 (17%), Positives = 57/137 (41%), Gaps = 12/137 (8%)

Query: 88  AQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRG----VALYG 143
           + P++ DGV+ +  S   + A+    G   W  +  +P        +  RG       +G
Sbjct: 154 SSPVVSDGVVIIHTSNGMLQALSESDGTIKWTVNLDMP-------SLSLRGESAPTTAFG 206

Query: 144 NLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPMIVNGKLITGVAGGEFGVV 203
             +  G  + ++ A+  + G+++W ++++       I+    +    ++ G      G  
Sbjct: 207 AAIVGGD-NGRVSAVMINQGQLIWQQRISQPGGATEIARLNDVDTTPVVAGNVVYALGYN 265

Query: 204 GKIQAYNPENGELLWMR 220
           G + A +  +G++ W R
Sbjct: 266 GNLTALDLRSGQITWKR 282