Pairwise Alignments

Query, 308 a.a., putative Periplasmic binding protein from Pseudomonas putida KT2440

Subject, 291 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  477 bits (1228), Expect = e-139
 Identities = 234/291 (80%), Positives = 259/291 (89%)

Query: 18  MRLWAVLLSGLLLWCAAAQAQVRNYDAIIAAGELKVAVYKDFAPYSFQDHGQPRGVDVEL 77
           MRL+A +L   LL C  AQAQVR+YD +IAAG++ VAVYKDFAPYSF+D    RGVDVEL
Sbjct: 1   MRLFAYVLGLALLCCQPAQAQVRSYDQMIAAGDINVAVYKDFAPYSFEDGATARGVDVEL 60

Query: 78  AQALATALGVRLQLIWAPPGEKLDDDLRDYIWRGSPLRHQQLADLMMRVPYDRAYAQRRN 137
           AQALATALGVRL LIWAP GEKLDDDLRDYIWRGS L +QQLADLMMR PYDR YAQ+RN
Sbjct: 61  AQALATALGVRLTLIWAPAGEKLDDDLRDYIWRGSQLHNQQLADLMMRAPYDRDYAQKRN 120

Query: 138 ELGELENAQVVMFGPYQQERWQVAYDRRRLASVASVAVFQQHPIGVEVDSVPSFYLTSVF 197
           + GELEN  VVMFGPYQ E+WQVAYDRRRL  VASVAVF+QHPIGVEVDSVPSFYLTSVF
Sbjct: 121 DQGELENGHVVMFGPYQNEQWQVAYDRRRLDRVASVAVFEQHPIGVEVDSVPSFYLTSVF 180

Query: 198 NGMLSARTHHYPGVQQAFAAMQAGQVDAVMAMRGEVDWQLHQAADPQLALAENAYPNLGK 257
           NGML+A+THHYP V QAFAAM+AG+VDAVMAMRGEVDWQ+H+A DPQLALAENAYPN+GK
Sbjct: 181 NGMLAAKTHHYPDVPQAFAAMKAGEVDAVMAMRGEVDWQVHEAHDPQLALAENAYPNMGK 240

Query: 258 QAWEIGMAVHESNRQLAYAVEEAMEAMIRDGRLKAMYAAYGLRYEVPEMYQ 308
           Q WEIGMAVHESNRQLAYAVEEA+E +IRDG ++A+YA YGL+YEVPEMYQ
Sbjct: 241 QRWEIGMAVHESNRQLAYAVEEALEGLIRDGAVQAIYARYGLQYEVPEMYQ 291