Pairwise Alignments

Query, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440

Subject, 398 a.a., FIG00854755: hypothetical protein from Variovorax sp. SCN45

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 38/245 (15%)

Query: 39  DNSLSLIDLQTL--EVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVATRKI-- 94
           DN L +IDL T    + +TL +G++P GL ++    L  +     + V V+ +A +K+  
Sbjct: 121 DNRLFVIDLTTTPPRLLDTLRIGKQPSGLSINRAGNLALVANRADNSVSVLRIAGKKVTL 180

Query: 95  IKELPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLG---QIEVGIEPEGMAV 151
           I  +  G         P+ R    +      + +ID   +KV      +  G+ P  + V
Sbjct: 181 IDTVAMGDSVAHVRFTPDGRRALAAKFPSHKIALIDVDGEKVSYNKLDLAAGLWPYNVDV 240

Query: 152 SPDGKWAVNTS-----------ETTNMLHWIDTSTQTLADSTLVDQRPRFVEFSKDGSRL 200
           +PDGK A+              +T +++  ++ +   + D  +V   P  +  S  G   
Sbjct: 241 TPDGKLALTADNGNAGASDGQVDTVSVID-MEAAPPRVVDKVVVGDGPEGLAVSPTGRHA 299

Query: 201 WASAEIG-------------GTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADG 247
            A    G             G+V +L +  ++V +     ++G+      P G   SADG
Sbjct: 300 VAVILRGSNAAKNAYFYNRNGSVVLLKIDGKKVTRANEVVVRGL------PEGAVWSADG 353

Query: 248 KYAFV 252
           KY +V
Sbjct: 354 KYLYV 358



 Score = 50.8 bits (120), Expect = 6e-11
 Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 32/233 (13%)

Query: 32  AWVSNEKDNSLSLIDLQTLEVT--ETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDV 89
           A V+N  DNS+S++ +   +VT  +T+ +G     +  + D +        S ++ ++DV
Sbjct: 158 ALVANRADNSVSVLRIAGKKVTLIDTVAMGDSVAHVRFTPDGRRALAAKFPSHKIALIDV 217

Query: 90  ATRKIIK---ELPSGKDPEQFALHPNDRWLYVSNEDDA--------LVTVID--TVTDKV 136
              K+     +L +G  P    + P+ +    ++  +A         V+VID      +V
Sbjct: 218 DGEKVSYNKLDLAAGLWPYNVDVTPDGKLALTADNGNAGASDGQVDTVSVIDMEAAPPRV 277

Query: 137 LGQIEVGIEPEGMAVSPDGKWAV-------NTSET--------TNMLHWIDTSTQTLADS 181
           + ++ VG  PEG+AVSP G+ AV       N ++         + +L  ID    T A+ 
Sbjct: 278 VDKVVVGDGPEGLAVSPTGRHAVAVILRGSNAAKNAYFYNRNGSVVLLKIDGKKVTRANE 337

Query: 182 TLVDQRPRFVEFSKDGSRLWASAEIGGTVTILDVTTRQVLKT-LNFQIKGVHP 233
            +V   P    +S DG  L+    I   +TIL +    ++ T  +F ++G HP
Sbjct: 338 VVVRGLPEGAVWSADGKYLYVGNFIDKDITILRLDGDTLVPTGKSFVLEG-HP 389



 Score = 43.9 bits (102), Expect = 7e-09
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 237 QPVGIKLSADGKYAFVALGPANHVAV--IDAKTFDVLDYLLVGRRVWQLAFTPDQSQLLA 294
           QP G+ ++  G  A VA    N V+V  I  K   ++D + +G  V  + FTPD  + LA
Sbjct: 145 QPSGLSINRAGNLALVANRADNSVSVLRIAGKKVTLIDTVAMGDSVAHVRFTPDGRRALA 204

Query: 295 TNGVSGDVSVIDAKQLKVLKS---VKVGRYPWGVVVTP 329
               S  +++ID    KV  +   +  G +P+ V VTP
Sbjct: 205 AKFPSHKIALIDVDGEKVSYNKLDLAAGLWPYNVDVTP 242