Pairwise Alignments
Query, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440
Subject, 484 a.a., hypothetical protein from Azospirillum sp. SherDot2
Score = 64.7 bits (156), Expect = 5e-15
Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 18/273 (6%)
Query: 64 GLLLSHDSKLLYICASDSDRVQVMDVATRKIIKELPSGKDPEQFALHPNDRWLYVSNEDD 123
G+ S D K L + + S+ V +D AT + G+ P + P+ + ++V+ +
Sbjct: 89 GMGFSPDHKTLAVVSIGSNSVTFIDTATNMVRHTTYVGRSPHEAFFTPDGKEVWVTVRGE 148
Query: 124 ALVTVIDTVTDKVLGQIEVGIEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTL 183
++V+DT + + +I+V P SPDG++ S +T ++AD +
Sbjct: 149 DYISVLDTTSFEEKTRIKVPAGPGMQIFSPDGRYGYICSSFNP-----ETVIVSVADHRI 203
Query: 184 ---VDQRPRF---VEFSKDGSRLWAS-AEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKV 236
V Q F + S DG ++W + +IG T +++T++ H
Sbjct: 204 LGHVKQESPFCPNIAASPDGKQVWFTLKDIGKTQVFSAEAPFDLIRTIDTGPITNH---- 259
Query: 237 QPVGIKLSADGKYAFVALGPANHVAVIDAKTFDVLDYLLVGRRVWQLAFTPDQSQLLATN 296
V + + +G +AFV +G N V V F+ + + VG + + D +++
Sbjct: 260 --VNLVTNRNGSFAFVTVGGLNEVKVFRTDDFEQVATIPVGNLPHGIWPSGDGTRVYVGL 317
Query: 297 GVSGDVSVIDAKQLKVLKSVKVGRYPWGVVVTP 329
+ +VID KV+ ++ +G+ P V P
Sbjct: 318 ENADQFAVIDTLTNKVIATIPIGQAPQAVAYVP 350
Score = 61.2 bits (147), Expect = 5e-14
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 36/265 (13%)
Query: 40 NSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVAT--RKIIKE 97
NS++ ID T V T VG+ P + D K +++ D + V+D + K +
Sbjct: 107 NSVTFIDTATNMVRHTTYVGRSPHEAFFTPDGKEVWVTVRGEDYISVLDTTSFEEKTRIK 166
Query: 98 LPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLGQI--EVGIEPEGMAVSPDG 155
+P+G + F+ P+ R+ Y+ + + ++ ++LG + E P +A SPDG
Sbjct: 167 VPAGPGMQIFS--PDGRYGYICSSFNPETVIVSVADHRILGHVKQESPFCP-NIAASPDG 223
Query: 156 K--W----------AVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFSKDGSRLWAS 203
K W + +++ IDT T + + ++ F A
Sbjct: 224 KQVWFTLKDIGKTQVFSAEAPFDLIRTIDTGPITNHVNLVTNRNGSF-----------AF 272
Query: 204 AEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAFVALGPANHVAVI 263
+GG + +V +T +F+ P P GI S DG +V L A+ AVI
Sbjct: 273 VTVGGLNEV------KVFRTDDFEQVATIPVGNLPHGIWPSGDGTRVYVGLENADQFAVI 326
Query: 264 DAKTFDVLDYLLVGRRVWQLAFTPD 288
D T V+ + +G+ +A+ P+
Sbjct: 327 DTLTNKVIATIPIGQAPQAVAYVPN 351
Score = 53.1 bits (126), Expect = 1e-11
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 30/207 (14%)
Query: 97 ELPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLGQIEVGIEPE--------- 147
+ P+ + DR +Y + + V+V D T+++LG I++G +P+
Sbjct: 25 QAPAAASDPDIPISGRDR-VYAAEQFSNTVSVSDPSTNRLLGVIKLG-DPQPGNLSPLYK 82
Query: 148 ------GMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFSKDGSRLW 201
GM SPD K S +N + +IDT+T + +T V + P F+ DG +W
Sbjct: 83 GQVLVHGMGFSPDHKTLAVVSIGSNSVTFIDTATNMVRHTTYVGRSPHEAFFTPDGKEVW 142
Query: 202 ASAEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAFVALGPANHVA 261
+ +++LD T +F+ K P S DG+Y ++
Sbjct: 143 VTVRGEDYISVLDTT--------SFEEKTRIKVPAGPGMQIFSPDGRYGYICSSFNPETV 194
Query: 262 VIDAKTFDVLDYLLVGRRVWQLAFTPD 288
++ V D+ ++G + F P+
Sbjct: 195 IV-----SVADHRILGHVKQESPFCPN 216
Score = 35.4 bits (80), Expect = 3e-06
Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 29/187 (15%)
Query: 65 LLLSHDSKLLYICASDSDRVQVMDVATRKIIKELPSGKDPEQFALHPNDRWLYVSNEDDA 124
L+ + + ++ + V+V + + +P G P + +YV E+
Sbjct: 262 LVTNRNGSFAFVTVGGLNEVKVFRTDDFEQVATIPVGNLPHGIWPSGDGTRVYVGLENAD 321
Query: 125 LVTVIDTVTDKVLGQIEVGIEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLV 184
VIDT+T+KV+ I +G P+ +A P+ AV + L
Sbjct: 322 QFAVIDTLTNKVIATIPIGQAPQAVAYVPN---AVPEGDGLQNL---------------- 362
Query: 185 DQRPRFVEFSKDGS----RLWASAEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVG 240
V K G RL A+ G T + + + + + + L + G+ P K +
Sbjct: 363 ------VPLGKAGEAAHLRLAAAGGKGKTPSTVSLFDQGLTQVLQASVTGLEPKKAYVLA 416
Query: 241 IKLSADG 247
+ DG
Sbjct: 417 LSRKVDG 423
Score = 26.6 bits (57), Expect = 0.001
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 33 WVSNEKDNSLSLIDLQTLEVTETLPVGQRPRGL 65
+V E + ++ID T +V T+P+GQ P+ +
Sbjct: 314 YVGLENADQFAVIDTLTNKVIATIPIGQAPQAV 346