Pairwise Alignments

Query, 263 a.a., ABC transporter from Pseudomonas putida KT2440

Subject, 371 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 20/204 (9%)

Query: 64  VYIIPGLACMILLFNGMQGSLSMVYDREMGSMRVLLTSPLPRPFLLGSKLLATSLISLLQ 123
           + I+  +  + ++  G     +++ +RE G++  LL  PL    ++ +K+ +  L+ +L 
Sbjct: 179 IQIVNNITILAIILTGT----ALLREREHGTLDHLLVLPLTALEIMLAKIWSNMLVVVLC 234

Query: 124 VYAFLAIA--WLYGVQPPAAGLLMALPALLLVAFMLSALGLLLSNAIRQLENFAGVMNFV 181
            +  L +    L GV P A  L + L    L  F  +ALG+ L+   R    F  +   V
Sbjct: 235 TWLSLEVVVKGLLGV-PLAGSLGLFLFVTALYLFASTALGIFLATLARSTPQFGLLAIPV 293

Query: 182 IFPLFFLSSALYPLWKMREASQWLYWLCAVNPFTHAVELVRFALYERL-------NLLAL 234
           I P+  LS    PL  M E   WL W+   +P TH V L    L+          ++LAL
Sbjct: 294 IIPMLLLSGGSTPLDSMPE---WLQWVMQGSPSTHFVSLSAAILFRDAGVSVVWPDVLAL 350

Query: 235 AVCLGLTALFTLLAILTFNPQHAA 258
           A   G+  LF  +A+  F    A+
Sbjct: 351 A---GIGLLFFAVALARFRKSLAS 371