Pairwise Alignments

Query, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

Subject, 593 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  181 bits (458), Expect = 1e-49
 Identities = 139/404 (34%), Positives = 210/404 (51%), Gaps = 27/404 (6%)

Query: 236 LNDQLLREIEERSQAESRLREAKREAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLE 295
           L   L    E+ + AE +L       ++A+  KT+FLAA SHDL QPL+A  LF + + +
Sbjct: 192 LTASLTMRFEKEALAE-QLSHQIAATQRASEEKTRFLAAASHDLRQPLHAIALFGAVIEK 250

Query: 296 R----DEPQNAAHLVRNVSNSLEDVENLLGTLVDISKLDAGVIKADVAPFALHELMDNLA 351
           +    DE  +A  L+  V      + + L  L+DIS+LDAG +   V P  L+ L   L 
Sbjct: 251 KLKGSDEWDHAVRLMDAVGT----LGDSLDILLDISRLDAGEVAPQVRPVELNPLFLALN 306

Query: 352 AEYVQVARSEGLELHFVGCSAVVRSDIQLLARILRNLLSNAIRYTPSGRVVLGCRRLRGG 411
             +V  A    L+L        V SD QLL R+L NL+ NA++YT  G VV+  R     
Sbjct: 307 NVFVAQAADLDLQLRLRATPCWVLSDPQLLQRLLSNLVHNALKYTTRGGVVVAARARGPL 366

Query: 412 VRIEVWDSGIGIAEEHLQDMFLEFKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRIRVRS 471
           V I+V D+GIGIA+EHL  +F EF + D    D+ +GLG+GL+IV++++ +L H ++VRS
Sbjct: 367 VWIDVCDTGIGIADEHLGRIFDEFYQIDNPGRDRTKGLGIGLSIVQRLSRLLAHPLQVRS 426

Query: 472 WLGKGSVFAVEVPLSTTAPKAQPSQVICEPMLERLRGA------RVWVLDNDAAICAGMR 525
            L  GS F + +P  T          +  P L  L GA      RV V+D++AAI   + 
Sbjct: 427 RLHHGSRFRLVLPAVT---------ALGSPPLAALPGAPLPLPRRVLVIDDEAAIRQAVA 477

Query: 526 TLLEGWGCRVVTALSEED---LARQVDNYHADADLLIADYHLDNDCNGVDAVARINARRA 582
            LL+  G  V    SE D   +     +     ++L+ D  L +  +G+ A  R+ AR  
Sbjct: 478 GLLQAHGLSVDAVASEADAEAVLAHAAHGSTPVEVLLCDVRLADGADGLAAAQRLRARFG 537

Query: 583 QPLPALMITVNYSNDLKQQIRELGHTLMHKPVRPMKLKTAMSHL 626
             L  L+IT   +   ++Q+R+ G  ++ KPV   +L  A++ L
Sbjct: 538 PGLQVLLITGETAPQRQRQMRDSGLQVLLKPVAADRLLQALASL 581