Pairwise Alignments
Query, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440
Subject, 802 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58
Score = 221 bits (563), Expect = 1e-61
Identities = 133/380 (35%), Positives = 217/380 (57%), Gaps = 11/380 (2%)
Query: 243 EIEERSQAESRLREAKREAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERDEPQNA 302
++ + QA AK+ AE+A +K++FL+A SHDL QPL +L LLER +
Sbjct: 195 DVSAQKQAAESREAAKKSAERATEAKSRFLSAASHDLRQPLQTLKLL-QGLLERSVGEGR 253
Query: 303 AH-LVRNVSNSLEDVENLLGTLVDISKLDAGVIKADVAPFALHELMDNLAAEYVQVARSE 361
A V+ + +L + +L +L+DI++++AG+++ V FA+ L+ L E+ AR+
Sbjct: 254 ARTFVQRMEETLSSMSGMLDSLLDINQIEAGMVEPQVVNFAIGNLLGLLFKEFYYPARAA 313
Query: 362 GLELHFVGCSAVVRSDIQLLARILRNLLSNAIRYTPSGRVVLGCRRLRGGVRIEVWDSGI 421
GL+LH V S VR+D +L +I+RNLLSNA++YT SG++++GCRR VR EVWD+GI
Sbjct: 314 GLQLHVVPSSLAVRTDPRLFEQIVRNLLSNALKYTTSGKILVGCRRRGTKVRFEVWDTGI 373
Query: 422 GIAEEHLQDMFLEFKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRIRVRSWLGKGSVFAV 481
GI E ++D+F E+ + D +DRGLGLGL+IV++++ +L R+ VRS L KGSVF +
Sbjct: 374 GIPESQIEDVFQEYLQLDASAGTEDRGLGLGLSIVKRLSELLELRVAVRSRLHKGSVFMI 433
Query: 482 EVPLSTTAPKAQPSQVICEPMLER------LRGARVWVLDNDAAICAGMRTLLEGWGCRV 535
E+ AP +P + P+ R L A V +++++ + ++ LE G V
Sbjct: 434 EI---DQAPAGEPLVPLRAPVDGRPHHTTALSSASVLIIEDENGMRDLLKMGLEQSGYVV 490
Query: 536 VTALSEEDLARQVDNYHADADLLIADYHLDNDCNGVDAVARINARRAQPLPALMITVNYS 595
+ + V D+++ADY+ NG+ A+ I + +PAL++T + S
Sbjct: 491 AATSTGAEALAIVRGLQFKPDVILADYNFPTGGNGIAAIEDIRQALRRNVPALILTGDIS 550
Query: 596 NDLKQQIRELGHTLMHKPVR 615
+ + +HKPV+
Sbjct: 551 SKALTTFAQHEIPYLHKPVK 570
Score = 34.3 bits (77), Expect = 2e-05
Identities = 138/648 (21%), Positives = 242/648 (37%), Gaps = 143/648 (22%)
Query: 62 RERTDALNQAMAELKAVNRLLSEA--RQRAETAHQHQIRLITDNVPALIAYLNADLVYEF 119
+E +LN+ EL A+N L EA RQRA A+ Q L + +VP L +L++ L F
Sbjct: 61 KEELQSLNE---ELTALNNQLHEALERQRA-VANDLQNVLYSTDVPTL--FLDSSLRIRF 114
Query: 120 TNKVYEEWYCWPHGVM--LGQSLREAHSEQHYQRLEGYVARALAGESVTFEFAETNINGQ 177
+ H V +G+ L + L+ L + + I G
Sbjct: 115 FTPATRSVF---HIVSSDVGRPLSDLSGFDGDGTLQTDAMATLHDGNTI----DREIGGS 167
Query: 178 E-RYMLRSYVPNRLASGEVVGIFVLIRDITERRNTAQALHQAYQHLEQRVRERTAELTSL 236
+ R+ +R P R S V G+ + D++ ++ A++ A + E+ ++ L++
Sbjct: 168 DGRWYVRRVKPYRGESKTVDGVVITFIDVSAQKQAAESREAAKKSAERATEAKSRFLSAA 227
Query: 237 ND---------QLLREIEERSQAESRLREAKREAEQA----------------------- 264
+ +LL+ + ERS E R R + E+
Sbjct: 228 SHDLRQPLQTLKLLQGLLERSVGEGRARTFVQRMEETLSSMSGMLDSLLDINQIEAGMVE 287
Query: 265 ----NLSKTKFLAAVSHDLLQPLNAARL----FTSALLERDEPQNAAHLVRNV-SNSLED 315
N + L + + P AA L S+L R +P+ +VRN+ SN+L+
Sbjct: 288 PQVVNFAIGNLLGLLFKEFYYPARAAGLQLHVVPSSLAVRTDPRLFEQIVRNLLSNALKY 347
Query: 316 VEN--------LLGTLVDISKLDAGVIKADVAPFALHELMDNLAAEYVQVARSEGLELHF 367
+ GT V D G+ + ++++ EY+Q+ S G E
Sbjct: 348 TTSGKILVGCRRRGTKVRFEVWDTGIGIPE-------SQIEDVFQEYLQLDASAGTEDRG 400
Query: 368 VGCS-AVVR--SDIQLLARILRNLLSNA------IRYTPSGRVVLGCRR----------- 407
+G ++V+ S++ L +R+ L I P+G ++ R
Sbjct: 401 LGLGLSIVKRLSELLELRVAVRSRLHKGSVFMIEIDQAPAGEPLVPLRAPVDGRPHHTTA 460
Query: 408 --------------LRGGVRIEVWDSGIGIAEEHLQDMFLEFKRGDVQRPD---QDRGL- 449
+R +++ + SG +A L RG +PD D
Sbjct: 461 LSSASVLIIEDENGMRDLLKMGLEQSGYVVAATSTGAEALAIVRGLQFKPDVILADYNFP 520
Query: 450 --GLGLAIVEKIAGILGHRIRVRSWLGKGSVFAV------EVPLSTTAPKAQPSQVICEP 501
G G+A +E I L + G S A+ E+P K + + E
Sbjct: 521 TGGNGIAAIEDIRQALRRNVPALILTGDISSKALTTFAQHEIPYLHKPVKLKDVVQVVET 580
Query: 502 MLERLRGAR-----------------VWVLDNDAAICAGMRTLLEGWGCRVVTALSEEDL 544
++ R G R + V+D++ I +R L EG G V T +S E+
Sbjct: 581 LVVRQTGERAEHISEPEDMEPMTGRLIEVVDDEKDIRDHLRALFEGEGWTVATYVSAEE- 639
Query: 545 ARQVDNYHAD-ADLLIADYHLDNDCNGVDAVARINARRAQPLPALMIT 591
+ +Y D + L+ D +L G++ + R+ R P ++IT
Sbjct: 640 --YIADYKPDRSGCLLVDAYLPG-MVGME-LLRLLKERQHRFPVIVIT 683