Pairwise Alignments

Query, 313 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 397 a.a., HTH-type transcriptional regulator GalR from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 3e-28
 Identities = 89/287 (31%), Positives = 139/287 (48%), Gaps = 11/287 (3%)

Query: 14  ARHLRLLIELDEHRSLLGAASSVGLTQPGASKALQEIETTFGTVLFNRTNRGLEPTAAGH 73
           AR L++ ++L E R +   A   GL+QP  S AL+ +E   G  LF RT+RGL+PT A  
Sbjct: 101 ARRLQVFVKLCETRHMQTVARHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPTVASR 160

Query: 74  CAIRYARLLQTDIANLRHDLDAILRGVGGRLAVGAI-MGAVPLLMKAVSQLASIQPQMSF 132
             +   R    ++  L  DL A+   + G + VGA+ +G   +L  A+ +  +  PQ+  
Sbjct: 161 DILFPIRRALNELRLLDSDLSAMQGTLRGVVHVGALPLGRSRILPDAILRFTAQHPQVRV 220

Query: 133 EIIEDTSQSLLTQIESGRLDIALCRTSVSNTPQLFASTFVQD----ETLAVIANIDHPLK 188
              E     L T++  G +D  L     +  P  +AS  V +    E + V+A   HPL 
Sbjct: 221 VTNESPFDLLATELRVGDVDFVL----GALRPHDYASDLVGEPLINEEMVVLARRGHPLL 276

Query: 189 HAPSLSLADLAESRWIVYRANMPMRVQLEREFHDAGLRFPLHLVETTSILATLSLLQNRP 248
           H   L+L  + ++RW++ RA  P R  L+  F  AGL  P  +VE+   LA +  L  R 
Sbjct: 277 HT-HLTLKGVHQARWVLPRAGSPARQLLDNCFAAAGLTAPWPVVESAD-LAVIRGLLVRS 334

Query: 249 DFVALVSIDVARQCAMNQQVSILPLSMGSVSDPYELVTRKGSQATPA 295
           D +A VS         + ++  LPL++   +    L+ R G   +PA
Sbjct: 335 DMLAAVSAHQLAYEIASGELQRLPLALPGTARAIGLMQRSGCLQSPA 381



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 18/70 (25%), Positives = 32/70 (45%)

Query: 17 LRLLIELDEHRSLLGAASSVGLTQPGASKALQEIETTFGTVLFNRTNRGLEPTAAGHCAI 76
          +R  I + E  S+  A   +   Q   ++A+ E+E  F   LF R   G+  T  G C +
Sbjct: 12 VRAFIRVAELGSVSRATEVLFRAQSVVTRAIAELEARFAVPLFERHANGMRLTDYGECLL 71

Query: 77 RYARLLQTDI 86
            A+ +  ++
Sbjct: 72 PRAQRVLAEL 81