Pairwise Alignments

Query, 309 a.a., Universal stress protein family from Pseudomonas putida KT2440

Subject, 300 a.a., universal stress protein UspA from Pseudomonas simiae WCS417

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 17/163 (10%)

Query: 13  LTKEPHMNPLKHILVATDLSPHAR-------NAAERAAYLSDAQQASLDLLYVANPAPFE 65
           +T+  H NPLK ILVA DLS              E A+ L+ +  A L LL ++N +   
Sbjct: 142 VTEARHPNPLK-ILVAIDLSHLEELTQGVNEQVLELASTLAASCGARLHLLSISNWSVVG 200

Query: 66  RLKQLVTP---DDDLLKRVLDSAGEKTHALAALLFQRYGISAGVQ-VASGSVITEINRVV 121
                V+    ++ L   V D+  E    LA+    RYGI    + + +G     I R  
Sbjct: 201 DTSTSVSTLSLNESLRDAVNDAQEEAFEVLAS----RYGIDGHRRHLLTGIPHAVIERFA 256

Query: 122 QDKHSDLLVCGARGQSVARRLLLGSTVQKLLNRMPCPLLVVKP 164
           Q    D++V GA   +    + +GST ++LLN  PC LLVV+P
Sbjct: 257 QQNEFDIVVLGA-SHARGGDMFIGSTAERLLNHPPCSLLVVQP 298



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 69/312 (22%), Positives = 114/312 (36%), Gaps = 40/312 (12%)

Query: 19  MNPLKHILVATDLSPHARNAAERAAYLSDAQQASLDLLYVANPAPFERLKQLVTP---DD 75
           M  LK IL+          A +RA  L+ A  ASL ++       F+ ++ L      D 
Sbjct: 1   MQKLKRILLIVPTEMTRTPAFDRAQALACATGASLHMV------AFDYVQALAVAGLFDH 54

Query: 76  DLLKRVLDSAGEKTHALAALLFQRYGISAGVQVASGSVITEINRV----------VQDKH 125
           + + R  +           L   R+ +    + A G V +E+             V D H
Sbjct: 55  EAMTRAREGY---------LQVHRHWLEQQARFAGGQVTSEVVWAKASPGHVLDYVNDFH 105

Query: 126 SDLLVCGARGQSVARRLLLGSTVQKLLNRMPCPLLVVKPAPRDAYRTVLVPVDFS----- 180
           +DL+V          R        +LL        +V  A       +LV +D S     
Sbjct: 106 ADLVVKDIHHVPALGRAFHQPLDWRLLRECEAHFHLVTEARHPNPLKILVAIDLSHLEEL 165

Query: 181 --SVSLRTIELAKAIAPQAEIILLHAYEAPFEASVRFAHLDHDTLT---HYRNVIRKDAQ 235
              V+ + +ELA  +A       LH       + V        TL+     R+ +    +
Sbjct: 166 TQGVNEQVLELASTLAASCGA-RLHLLSISNWSVVGDTSTSVSTLSLNESLRDAVNDAQE 224

Query: 236 VQLAALSEAAGLADARQILVHGDPGWRIAEQEQELECDLIVVGKQGASALEELLVGSVTK 295
                L+   G+   R+ L+ G P   I    Q+ E D++V+G   A    ++ +GS  +
Sbjct: 225 EAFEVLASRYGIDGHRRHLLTGIPHAVIERFAQQNEFDIVVLGASHARG-GDMFIGSTAE 283

Query: 296 HVLNESQCDVLV 307
            +LN   C +LV
Sbjct: 284 RLLNHPPCSLLV 295