Pairwise Alignments

Query, 408 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

Subject, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

 Score =  166 bits (420), Expect = 1e-45
 Identities = 121/385 (31%), Positives = 193/385 (50%), Gaps = 7/385 (1%)

Query: 24  LAILSVAVGAFALVTSEFLPVGVLNDVASDLGISAGLAGLMVTLPGIMAALAAPLISVGV 83
           L++L +A+ AFA+ T+EF+ +G+L DVA+DLG+S   AG +VT   +  A+ AP +++  
Sbjct: 3   LSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALAT 62

Query: 84  GALDRRYLLIGLTLIMIIANAIVAYAGDFNLLLVGRVLLGISIGGFWATAIALSGRLAPD 143
             L R+  L+ L  I II N + A A D+N+L+  RV+  +  G F+     ++  L P 
Sbjct: 63  AKLPRKAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLVPA 122

Query: 144 GMGVAKANSIIMAGVTLATVVGVPVGTWLSGLMGWRMTFLVTALVGVPVLLAQVFLLPRL 203
               A A +++  G+TLA V+GVP+GT L    GWR TF    ++GV  L+  +  LP  
Sbjct: 123 NKR-ASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPAK 181

Query: 204 MPEKAIRIRDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKQNAGFDGPTIGSLL 263
             E+ + +R   A        + L    L   + F  +TYVAP      G     +   L
Sbjct: 182 RDEEKLDMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTL 241

Query: 264 LLYGVAGFMGNIFAGFAANRSVRHTLMLVALMIAVSTALFPHFATGMTGAAMLIALWGFA 323
           LL G+   +GNI  G  A++ +  TL+ V + +AV +      +  +    + + LW  A
Sbjct: 242 LLIGLGLTVGNIIGGKLADKRLAATLIGVFISMAVVSTALTWTSVAVIPTEITLFLWATA 301

Query: 324 -FGAFPAC-ANIWMFVVAPKDVERGMPLFVAMFQVIIAVGSFFGGQVVDH-MG-TAVLLS 379
            F A PA   N+  F  A  ++     L +  F +  A+G++ GG V+ H  G T V L+
Sbjct: 302 SFAAVPALQINVVTFGKAAPNLV--STLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPLA 359

Query: 380 LATALVGCGFVTVLVLGRNVSNDLA 404
            A   +    VT++   +    DLA
Sbjct: 360 AAVLAILALLVTLITFRQTGDADLA 384