Pairwise Alignments

Query, 496 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 444 a.a., DNA-binding transcriptional regulator from Escherichia coli ECRC101

 Score =  188 bits (478), Expect = 3e-52
 Identities = 140/471 (29%), Positives = 222/471 (47%), Gaps = 34/471 (7%)

Query: 20  YRQIVEGLVAAISEGRLRPGTPLPGTREMAQLLNVNRKTVILAYEEAETKGWLQSVQRRG 79
           Y+ I   L   I +G+L+PG  LP +R  +Q L V+R TV  AY E   +GWL    + G
Sbjct: 4   YQDIARQLKTVIEQGKLKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAG 63

Query: 80  TFVSQQLAPGTAAASGAVRPFALALPEEPAVAYFKANEQAVA-QQGRPGALFFDNGACDH 138
           TFVS+Q+ P  +A                 VA+   ++Q +  Q G P        A D 
Sbjct: 64  TFVSEQIHPQQSAVD--------------VVAFAGESQQPLPFQMGLP--------ALD- 100

Query: 139 RLLPQAVLHRYYRNALRSSFTSNSVRHGSECSSRNLRSALADMLRHNRSLNVGAEHICLT 198
            L P+ +  R     LR+  T   +  G  C    LR A+ D LR +R ++   E + +T
Sbjct: 101 -LFPRELWARVMGRRLRTQ-TRFDLALGDVCGEAALREAIVDYLRVSRGIDCQPEQVFIT 158

Query: 199 QGVQMSLSLVASVLLKPGDVVLVERLSYPPAWEIFRQLGARLVTVELDHEGCRVDQLDAL 258
            G   S++L+   L +PGD + +E   +P    I  + G  ++ V +D  G  +D    +
Sbjct: 159 HGYAASMALILHALAQPGDGMWMEDPGFPLIRPIVTRHGVEILPVPVDDNG--LDVTSGI 216

Query: 259 CRQHKVRMMYITPHHQFPTTVSLPAGRRQQLLELARQHAFCVVEEDYDYEYHFAGRPYLP 318
                 R   ITP HQ P  V+L   RR Q+LE A +    ++E+DYD E+ + G+P   
Sbjct: 217 QNYPDARFALITPAHQSPLGVALSLARRYQILEWAERSQAWIIEDDYDSEFRYHGKPLPA 276

Query: 319 LASDRQQRHVIYIGSLSKPLGSTFRCSYIVAPVEVTTVLERRAMLTLGQGDAVMQQMLAD 378
           L S    + VIY G+ SK L    RC+++V PVE  +   ++A L       + Q  LAD
Sbjct: 277 LKSLDAPQRVIYAGTFSKALFPALRCAWLVVPVEQISQFRQQASLEPCAVPVLWQNTLAD 336

Query: 379 LINDGELKKHLRRVNREYRRRRETLLGCLRDAFGEQISVQAPEGGLALWVRFADEINVDQ 438
            I +G   +HL+++ + Y +RR+ +   L     +   V   +GG+ + ++ A   N   
Sbjct: 337 FIREGHFWRHLKKMRQHYAQRRQWIEQALTQ---QGFQVVPQKGGIQMVIKLAG--NDVT 391

Query: 439 LVDKALERDLVVRSGRQFSPFGHAENALRLGFASLDADEI-RQATQRLADA 488
            V KA    L V++   +      +  L L F ++ ++ + RQ  Q+L  A
Sbjct: 392 FVHKANAAGLAVQALSDWRIRSSEDGGLLLSFTNIVSESMARQVAQQLRSA 442