Pairwise Alignments

Query, 167 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 167 a.a., type VI secretion system contractile sheath small subunit from Dickeya dianthicola ME23

 Score =  182 bits (461), Expect = 3e-51
 Identities = 96/166 (57%), Positives = 125/166 (75%), Gaps = 3/166 (1%)

Query: 1   MSKNT--GSVAPKERVNIKYVPATSDEQAEVELPHKMLVLGDF-GLDDSRALEDRQVMRI 57
           M+K T   SVAPKER+NIKYVPAT  +QAE+ELP  ++V+G+  G  +   +E+RQ + I
Sbjct: 1   MAKGTDGASVAPKERINIKYVPATGGQQAEIELPLTLMVVGNMKGRTEETPIEERQTVSI 60

Query: 58  DKHTFNSVLNDANVSLDVTVPSRLGTAPDTELAVHLQFRSINDFGPDRIARQVPELNKLL 117
           DK+ F SV+ +AN+ L+ +VP+RL      +L V L   S+NDF PDRIA+QVPEL+KLL
Sbjct: 61  DKNNFTSVMKEANLELNFSVPNRLEEDSQDDLPVKLSIGSLNDFSPDRIAQQVPELHKLL 120

Query: 118 ALREALVALKGPLGNVPAFRKQLQHLLNNEQARKQLAQELDLVLEA 163
            LREALVALKGPLGN+PAFR +LQ LL++E+AR QL +ELDLV  A
Sbjct: 121 ELREALVALKGPLGNIPAFRNRLQDLLSSEEARAQLLKELDLVKPA 166