Pairwise Alignments

Query, 258 a.a., Transcriptional regulator, IclR family from Pseudomonas putida KT2440

Subject, 291 a.a., transcription regulatory protein (pca regulon) from Pseudomonas putida KT2440

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 62/246 (25%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 4   SQIERAFSLVESLTGEPQGLPLQTLAERLDIPKSAAHRMLTELVRLGYVRQNRENSRYQL 63
           + + R  +++++     + L +  ++ R +IP++A  R L  L++LGY     +   Y L
Sbjct: 46  TSLARGLAVIQAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLIKLGYA--TTDGRTYSL 103

Query: 64  SAKLVALSFRYLASSGADI-IQPILDRLAQDSGELVRLGVIDGARQTWIAKSQGARSGLR 122
             K++ L   YL+S+   I  QP LDR++    E   +  ++G    +IA+S      + 
Sbjct: 104 LPKVLTLGHAYLSSTPLAISAQPYLDRISDQLHEAANMATLEGDDILYIARSATVERLIS 163

Query: 123 YDPDMGRDAPLFYTASGHAWLASLDDEQALQMVLRQGIADPDQFGPNAPRSTDELLAYLH 182
            D  +G   P + T+ G   LA++DD    + + R  +        N P S   L A + 
Sbjct: 164 VDLSVGGRLPAYCTSMGRILLAAMDDTSLREYLERADLKARTSRTLNDPES---LFACIQ 220

Query: 183 RARERGYAWVEETSAIGTSALAAVVRRPQSDEVIGVLSIAGPSARLAQSRL-AALAPLLL 241
           + R +G+  V++    G  ++A  V    S +V+  L+++    R+ +S L     P+LL
Sbjct: 221 QVRAQGWCVVDQELEQGLRSIAVPV-YDASGQVLAALNVSTHVGRVTRSELEQRFLPILL 279

Query: 242 SAAEEL 247
           +A+ +L
Sbjct: 280 AASRDL 285