Pairwise Alignments

Query, 258 a.a., Transcriptional regulator, IclR family from Pseudomonas putida KT2440

Subject, 271 a.a., HTH-type transcriptional repressor AllR from Escherichia coli ECRC101

 Score = 83.6 bits (205), Expect = 4e-21
 Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 6/246 (2%)

Query: 6   IERAFSLVESLTGEPQGLPLQTLAERLDIPKSAAHRMLTELVRLGYVRQNRENSRYQLSA 65
           +ER  ++++ L        +  ++  LD+P S   R+L  L    +V Q+ +   + +  
Sbjct: 24  LERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGL 83

Query: 66  KLVALSFRYLASSGA-DIIQPILDRLAQDSGELVRLGVIDGARQTWIAKSQGARSGLRYD 124
            +  +   Y+ +     +  P + RL   SGE V + + +G     I + +  +S +R  
Sbjct: 84  GVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLE-CKSMVRMC 142

Query: 125 PDMGRDAPLFYTASGHAWLASLDDEQALQMVLRQGIADPDQFGPNAPRSTDELLAYLHRA 184
             +G   PL  + +G A L  L +E+ + ++L+ G+    QF P        LL  L +A
Sbjct: 143 APLGSRLPLHASGAGKALLYPLAEEELMSIILQTGL---QQFTPTTLVDMPTLLKDLEQA 199

Query: 185 RERGYAWVEETSAIGTSALAAVVRRPQSDEVIGVLSIAGPSARLAQSRLAALAPLLLSAA 244
           RE GY   +E   +G + +A+ +       V+  +SI+GPS+RL + R  +   L+   A
Sbjct: 200 RELGYTVDKEEHVVGLNCIASAI-YDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTA 258

Query: 245 EELSAA 250
            ++S A
Sbjct: 259 RDISTA 264