Pairwise Alignments

Query, 597 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 604 a.a., Multidrug resistance ABC transporter ATP-binding/permease protein BmrA from Xanthobacter sp. DMC5

 Score =  262 bits (670), Expect = 3e-74
 Identities = 206/603 (34%), Positives = 304/603 (50%), Gaps = 40/603 (6%)

Query: 4   SSTPLDD-----AAPSTNKARSPLSRV---LSPIRGRLA--LSAVLAAAGSMLALVPLAG 53
           SS P+D      AA    +   PL+ +   L   RGR+A  L A+LAAA + LAL P+A 
Sbjct: 7   SSAPVDSSETRAAAEKRRRDLKPLAGLAPYLKRYRGRVAAALGALLAAALATLAL-PIA- 64

Query: 54  IAHIAHLALSETATSGAIGRAIAASIASLFTGMTLITAAEMLAHQADNHITHHLRVAIGQ 113
           +  +     +E   +G + +     +A          A   L       +   LR A+  
Sbjct: 65  VRRMIDFGFAEDH-AGLVDQYFGVLVAVAAVLALASAARYYLVTTLGERVVSDLRTAVFA 123

Query: 114 RLMQVPLGWFSERASSEVKRAMQDDIGTLHSLTAHFFTTLGRTVGAVLISVAYLFAMDWR 173
           RL+ +   ++    S E+   +  D   L S      +T  R +   + SVA +     R
Sbjct: 124 RLVTLDGAFYDSARSGELTSRLTADTTQLKSAVGASASTALRNLMMCIGSVAMMVVTSPR 183

Query: 174 LAVVVLLPFPAFFLFLH---RAIKASAAHMGDVVAGMARIDNAVVEFVNGMPLVKAFGGR 230
           L+ +VL+  P   L L    R ++       D +A  +       E +N M  ++A    
Sbjct: 184 LSGLVLVAIPIIVLPLMASGRKVRRLTRQAQDTLADASAY---AAEALNSMRALQAASAE 240

Query: 231 GNAQDRYRAAVDAFANTFTGFTRPLVAAMARA----NALIAPVTVVGVVLLAGMAFVALG 286
           G A+ R+  AV+        F     A  AR      A+      V  VL AG   V  G
Sbjct: 241 GVARQRFDGAVEE------AFGAARQATQARGWLTGIAIFLVFGSVVAVLWAGAQSVLAG 294

Query: 287 WIEPLQILPFALVAPGLCAPLQLLHYITHDLNNAVGAAQRVQVLLDT------PVLPAPA 340
            +    +  F L A    A L  L     +++ A GAA+R+  LL        P  P P 
Sbjct: 295 TMTSGALGQFVLYAVLAAASLGNLSETWGEMSAAAGAAERIGELLKVEPQVRPPARPVPL 354

Query: 341 VGSLPNGSELRVEQLSHAYA--PGNNVLDDVSFTLAPGTTTAIVGPSGAGKSTLARLLLR 398
              +     +R +++S +Y   P  + L  ++F++ PG   A+VGPSGAGKST+ +LL R
Sbjct: 355 PARISGA--IRFDEVSFSYPTRPDQSALAAIAFSIRPGERVALVGPSGAGKSTVFQLLER 412

Query: 399 FFDPDAGRITLGGVDLRQIESRELYRRIGFVLQEVRLIHASVADNIALGKPAATREQVEA 458
           F+DP AGRI L G+D+R+ +   + R++  V QEV +   SV  NI LG+P AT  +VE 
Sbjct: 413 FYDPQAGRILLDGIDIREADPVAVRRQMALVPQEVAIFADSVRANIRLGRPEATDAEVEE 472

Query: 459 AARLANIHTRILQLPRGYDSVVGE-DAQLSGGEQQRLSIARAVLLDPPVLVLDEATAAAD 517
           A R A +   + +LP+G+D++VGE    LSGG++QR+ IARA+L   P+L+LDEAT+A D
Sbjct: 473 AGRAALVDEFVARLPQGWDTMVGERGVMLSGGQRQRIVIARAILRGAPILLLDEATSALD 532

Query: 518 AESEAAIQDALSRFARGRTLLVIAHRLDTVMHADQILVLDQGALCEQGRHSELLNRQGLY 577
           AESE  +Q AL R   GRT LVIAHRL TV+ AD+ILV++ G + ++G H+EL+ + GLY
Sbjct: 533 AESETLVQTALERSMEGRTTLVIAHRLSTVLSADRILVMEAGRIMDEGTHAELVAKGGLY 592

Query: 578 ARL 580
           ARL
Sbjct: 593 ARL 595