Pairwise Alignments

Query, 597 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  244 bits (623), Expect = 7e-69
 Identities = 171/491 (34%), Positives = 252/491 (51%), Gaps = 18/491 (3%)

Query: 103 ITHHLRVAIGQRLMQVPLGWFSERASSEVKRAMQDDIGTLHSLTAHFFTTLGRTVGAVLI 162
           + H LRVA+  +L+ +P  +F    S  +   +  ++  +          + R    V+ 
Sbjct: 111 LVHDLRVALFNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVF 170

Query: 163 SVAYLFAMDWRLAVVVLLPFPAFFLFLHRAIKASAAHMGDVVAGMARIDNAVVEFVNGMP 222
             AYL  M+W L +V++   P   + +  A K        +   M  + +   E + G  
Sbjct: 171 LFAYLLWMNWHLTLVMVAILPVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYR 230

Query: 223 LVKAFGGRGNAQDRYRAAVDAFANTFTGFTRPLVAAMARANALIAPVTVVGVV-LLAGMA 281
           +V++FGG    Q R+  A  +  +            M +  +L  P+  + +   +A + 
Sbjct: 231 VVRSFGGEAYEQQRFGQASQSNTDK--------QLRMTKTGSLYTPMLQLVIYSAMAALM 282

Query: 282 FVAL---GWIEPLQILPFALVAPGLCAPLQLLHYITHDLNNAVGAAQRVQVLLD-TPVLP 337
           F+ L   G      ++ +   A  L  P++ L  ++  +   +  A+ +   LD  P + 
Sbjct: 283 FLVLFLRGDSTAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVD 342

Query: 338 APAVGSLPNGSELRVEQLSHAYAPGNN--VLDDVSFTLAPGTTTAIVGPSGAGKSTLARL 395
              V        L V  LS  Y PG    VL D+SF   PG   A+VG SG+GKSTLA L
Sbjct: 343 TGTVEKERVEGRLEVRNLSFTY-PGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAAL 401

Query: 396 LLRFFDPDAGRITLGGVDLRQIESRELYRRIGFVLQEVRLIHASVADNIALGKPA-ATRE 454
           + RF+  D G+I L GV++     R L R +  V Q V L + +VA+NIA G  A A R 
Sbjct: 402 IPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRA 461

Query: 455 QVEAAARLANIHTRILQLPRGYDSVVGEDAQL-SGGEQQRLSIARAVLLDPPVLVLDEAT 513
            +EAAA  A     + +LP+G+D+ VGE+  L SGG++QRL+IARA+L + P+L+LDEAT
Sbjct: 462 DIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEAT 521

Query: 514 AAADAESEAAIQDALSRFARGRTLLVIAHRLDTVMHADQILVLDQGALCEQGRHSELLNR 573
           +A D ESE  IQ AL    +GRT LVIAHRL T+  ADQILV+DQG L E+G H+ELL  
Sbjct: 522 SALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHTELLAA 581

Query: 574 QGLYARLWAQG 584
            G YARL A G
Sbjct: 582 NGHYARLHAMG 592