Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 616 a.a., Lipid A export ATP-binding/permease protein MsbA from Xanthobacter sp. DMC5

 Score =  215 bits (547), Expect = 5e-60
 Identities = 169/577 (29%), Positives = 286/577 (49%), Gaps = 42/577 (7%)

Query: 8   LLGECAPAWRRYLLMTVLYGVFSGLTISTLAPLMLHLLNSEIHA-------ASAWLVVLA 60
           LL +    W+ Y+L  V  G  +  T       + +L+N  ++A       A+ W V   
Sbjct: 26  LLSDGRKHWKGYVLAFVFMGTMAACTAG-----LAYLMNDAVNAIFVHPTPAAVWAV--- 77

Query: 61  AGLTLCWAWRRQVEKAGISLAVA-----VLQGGRQHIGAQVAQLPLGWFTPDNTARLGHV 115
           +G+ +  +  +     G S+ +A     V+   ++    ++      +F   +TA +   
Sbjct: 78  SGIVMVLSIIKGASAYGQSITMARIGNRVVADNQKRAFDRLLLQDAAYFGHRHTAEITTR 137

Query: 116 ITQGTMAVAQLPAHVLTPLISSSVTPLVLLVALFILHPPLGLVALLALPALAAVLLFSAR 175
            T G          V+T +   +++ ++L    F+  P L ++AL+ +PA    ++ + +
Sbjct: 138 FTAGASGARGALDLVVTSIGRDALSLVMLAGVAFVQDPFLAVIALVVMPA---AVIGTRK 194

Query: 176 LGRRADHAFHQHFAAA---SQRMVEFAQAQSVLRAFNGEGGGTRLLAQSLERQRSSGMGL 232
           L ++A   F   F +    S  ++E  Q    ++A+  E        + ++    +   L
Sbjct: 195 LIKKAKTIFTTGFTSGVKLSSIVMEVFQGIRTVKAYTLEPVMRERTHKFIDDVEINANRL 254

Query: 233 IIRASLSALLNSWAVQATFAALLVAAGLWFGDQAGGQAQDAVAVIVALVLVCRFIDPLQD 292
           +   + S+ L           +++ AG +   + G       +V+ AL+L     +P + 
Sbjct: 255 VRTQAKSSPLMETLGGLAIGGVILYAG-YNVIELGRSPGQFFSVLTALLLA---YEPAKR 310

Query: 293 VAS-HVEILRGAHGQLQEIERILAAKPLPEPASPHRPVG------GAINLQGVSLRYNPT 345
           ++  HVE++    G     + + A    P P +    VG      G +  + V   Y P 
Sbjct: 311 LSRLHVELVSHVMGARMLFDLLDA----PAPDADSSGVGALPRPRGRVEFKDVVFAYRP- 365

Query: 346 GPDVLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRIGGVDVRQMARAS 405
           G +VL++++L    G  TA++G SG GKT+++ LI RF+D   G+V I  VD R ++R S
Sbjct: 366 GENVLRSLDLVAEPGRTTALVGQSGGGKTTIINLIERFYDPQSGAVLIDDVDTRSVSRTS 425

Query: 406 LTDTVSQVLQDTWLFQGSIADNIRIGKPDASDAEVLQAAHMAGLGHTLERLRGGLDTSVG 465
           +  +V+ V QD +LF G+I +NI  G+P AS+ E++ AA  A     +     G DT+VG
Sbjct: 426 VRASVALVSQDVYLFSGTIRENIGFGRPGASEEEIVAAAKAAHAHPFIMSFENGYDTAVG 485

Query: 466 EGGAQLSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAVIAQTLHSLHGRCTLVVI 525
           E GAQLSGG+RQR+ IARA ++ AP+LL+DEATAALD+E++A + + L  L    T +VI
Sbjct: 486 EHGAQLSGGQRQRIAIARAFLKNAPILLLDEATAALDSESEAEVQKALAELAHERTTIVI 545

Query: 526 AHQLSTVAMADHIVVLDAGQVVEQGTPATLRANGGHY 562
           AH+L TV  AD I V++ G+VVE GT   L A  G Y
Sbjct: 546 AHRLQTVVRADRICVIEGGRVVESGTHDELIARRGRY 582