Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 604 a.a., Multidrug resistance ABC transporter ATP-binding/permease protein BmrA from Xanthobacter sp. DMC5

 Score =  226 bits (575), Expect = 3e-63
 Identities = 177/540 (32%), Positives = 280/540 (51%), Gaps = 47/540 (8%)

Query: 56  LVVLAAGLTLCWAWRRQVEKAGISLAVAVLQGGRQHIGAQVAQLPLGWFTPDNTARLGHV 115
           LV +AA L L  A R  +     +L   V+   R  + A++  L   ++   ++AR G +
Sbjct: 88  LVAVAAVLALASAARYYLVT---TLGERVVSDLRTAVFARLVTLDGAFY---DSARSGEL 141

Query: 116 ITQGTMAVAQLPAHVLTPLISSSVTPLVLLVA----LFILHPPLGLVALLALPALAAVLL 171
            ++ T    QL + V     S+++  L++ +     + +  P L  + L+A+P +   L+
Sbjct: 142 TSRLTADTTQLKSAVGASA-STALRNLMMCIGSVAMMVVTSPRLSGLVLVAIPIIVLPLM 200

Query: 172 FSARLGRRADHAFHQHFAAASQRMVEFAQAQSVLRAFNGEGGGTRLLAQSLE------RQ 225
            S R  RR         A AS    E   +   L+A + EG   +    ++E      RQ
Sbjct: 201 ASGRKVRRLTRQAQDTLADASAYAAEALNSMRALQAASAEGVARQRFDGAVEEAFGAARQ 260

Query: 226 RSSGMGLIIRASLSALLNSWAVQATFAALLVAAGLWFGDQ---AGGQAQDAVAVIVAL-V 281
            +   G +   ++  +  S           V A LW G Q   AG     A+   V   V
Sbjct: 261 ATQARGWLTGIAIFLVFGS-----------VVAVLWAGAQSVLAGTMTSGALGQFVLYAV 309

Query: 282 LVCRFIDPLQDVASHVEILRGAHGQLQEIERILA-----AKPLPEPASPHRPVGGAINLQ 336
           L    +  L +    +    GA  ++ E+ ++       A+P+P PA     + GAI   
Sbjct: 310 LAAASLGNLSETWGEMSAAAGAAERIGELLKVEPQVRPPARPVPLPAR----ISGAIRFD 365

Query: 337 GVSLRYNPTGPD--VLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRIG 394
            VS  Y PT PD   L  +   I  G   A++G SG+GK+++ +L+ RF+D   G + + 
Sbjct: 366 EVSFSY-PTRPDQSALAAIAFSIRPGERVALVGPSGAGKSTVFQLLERFYDPQAGRILLD 424

Query: 395 GVDVRQMARASLTDTVSQVLQDTWLFQGSIADNIRIGKPDASDAEVLQAAHMAGLGHTLE 454
           G+D+R+    ++   ++ V Q+  +F  S+  NIR+G+P+A+DAEV +A   A +   + 
Sbjct: 425 GIDIREADPVAVRRQMALVPQEVAIFADSVRANIRLGRPEATDAEVEEAGRAALVDEFVA 484

Query: 455 RLRGGLDTSVGEGGAQLSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAVIAQTL- 513
           RL  G DT VGE G  LSGG+RQR+ IARA++R AP+LL+DEAT+ALDAE++ ++   L 
Sbjct: 485 RLPQGWDTMVGERGVMLSGGQRQRIVIARAILRGAPILLLDEATSALDAESETLVQTALE 544

Query: 514 HSLHGRCTLVVIAHQLSTVAMADHIVVLDAGQVVEQGTPATLRANGGHYARMLE-QRHAA 572
            S+ GR TL VIAH+LSTV  AD I+V++AG+++++GT A L A GG YAR+ + Q HAA
Sbjct: 545 RSMEGRTTL-VIAHRLSTVLSADRILVMEAGRIMDEGTHAELVAKGGLYARLAQLQFHAA 603