Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 1191 a.a., Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 / Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 from Variovorax sp. SCN45

 Score =  229 bits (583), Expect = 6e-64
 Identities = 186/593 (31%), Positives = 290/593 (48%), Gaps = 30/593 (5%)

Query: 4    TFVRLLGECAPAWRRYLLMTVLYGVF---SGLTISTLAPLMLHLLNSEIHAASAWLVVLA 60
            T   LL    P WR  L+ T+L GV    + + +  L+ L++  +  +  A SA +V L 
Sbjct: 608  TLATLLSVVRP-WRGTLIATILLGVARVAAFIGVGVLSALVVAAIRDD-RATSALVVGLL 665

Query: 61   AGLTLCWAWRRQVEKAGISLAVAVLQGGRQHIGAQVAQLPLGWFTPDNTARLGHVITQGT 120
                L   +         ++A  +L   R  +  ++ +L   +     +  L  + T   
Sbjct: 666  VAAPLAALFHWLESWLAHAMAYQLLADMRVKLYDKLERLAPAYLLQRRSGDLVALATHDV 725

Query: 121  MAVAQLPAHVLTPLISSSVTPLVLLVALFILHPPLGLVALLALPALAAVLLFSAR----- 175
              V    AH + P I S + PL +L  L +   P+ L ALL   A A V   + R     
Sbjct: 726  EMVEYFYAHTIAPAIVSVLVPLTVLCFLAVYSWPVAL-ALLPFLAYALVSPINGRRKIDA 784

Query: 176  LGRRADHAFHQHFAAASQRMVEFAQAQSVLRAFNGEGGGTRLLAQSLERQRSSGMGLIIR 235
            LG RA HA  +     S    +  Q  + L AF   G       +  ++ R+  + ++  
Sbjct: 785  LGDRARHALGE----MSAHTADTIQGLADLTAFQATGRRRVQFLEIADQCRARRLDML-- 838

Query: 236  ASLSALLNSWAVQATFAALLVAAGLWFGDQAGGQAQDAVAVIVALVL-----VCRFIDPL 290
            A LS     + V      L VAA       AG  +   + ++V + L     V       
Sbjct: 839  ADLSRQTAWFEVAMGLGGLAVAAVGALQVAAGALSAGMLPLLVLIALATFLPVSEISQVS 898

Query: 291  QDVASHVEILRGAHGQLQEIERILAAKPLPEPASPHRPVGGAINLQGVSLRYNPTGPDVL 350
            + +A  +   R  H    E E + A  PLP P + H   G ++  + VS  Y     D L
Sbjct: 899  RQLADTIAATRRLHVVNNEPEPV-ADGPLPPPEASH---GLSLAFERVSFAYPGKPQDTL 954

Query: 351  QNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRIGGVDVRQMARASLTDTV 410
            ++++  +PAG+  AV+GASG+GK+++  L+ RF+D  +G+V++ GVDVRQ+    L + V
Sbjct: 955  RDLSFVVPAGATVAVVGASGAGKSTVASLMLRFWDPRQGTVKLDGVDVRQLRLDGLRERV 1014

Query: 411  SQVLQDTWLFQGSIADNIRIGKPDASDAEVLQAAHMAGLGHTLERLRGGLDTSVGEGGAQ 470
            + V QDT+LF  ++  NIR+ +PDAS  E+  A   A L   ++ L  GL T VGE G Q
Sbjct: 1015 ALVTQDTYLFNDTLEGNIRLARPDASREELALALQQAALSAFVQTLPEGLATRVGERGMQ 1074

Query: 471  LSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAVIAQTLHSLHGRCTLVVIAHQLS 530
            LSGG+RQR++IARA ++ APVL++DEAT+ LD  ++A +   L  L    T +V+AH+LS
Sbjct: 1075 LSGGQRQRISIARAFLKNAPVLILDEATSHLDTLSEAQVRGALDVLMRHRTTLVVAHRLS 1134

Query: 531  TVAMADHIVVLDAGQVVEQGTPATLRANGGHYARMLEQRHAANGWRIGAPRVE 583
            T+  AD I+VL+ G + E GT   L    G YA++   + A+     G PR++
Sbjct: 1135 TIRDADLILVLENGALAEAGTHEQLLRRQGVYAKLASHQGAS----FGGPRLQ 1183



 Score =  219 bits (557), Expect = 7e-61
 Identities = 160/498 (32%), Positives = 251/498 (50%), Gaps = 23/498 (4%)

Query: 84  VLQGGRQHIGAQVAQLPLGWFTPDNTARLGHVITQGTMAVAQLPAHVLTPLISSSVTPLV 143
           V Q  R  +  ++  L   WF    T  +   +  G   +       L  ++ ++  P  
Sbjct: 72  VQQALRARLYDRIVALGPAWFANQRTGGVMLTVVDGVEQLQTFFGQYLPQVVIAAAAPFA 131

Query: 144 LLVALFILHPPLGLVALLALPALAAVL--LFSARLGRRADHAFHQHFAAASQRMVEFAQA 201
           +   +     P  LV L A  AL A+   +    L RRA  A  +      +  ++  Q 
Sbjct: 132 IFAVIAFWDVPTALVFLAA--ALFALFGPMAVHMLDRRASLARTRSLNEFGEEFLDAVQG 189

Query: 202 QSVLRAFN-GEGGGTRLLAQSLERQRSSGMGLIIRASLSALLNSWAVQATFAALLVAAGL 260
              L+++  G+  G RL A++  R+ S     ++  SL     S    A  AAL +  G 
Sbjct: 190 LPTLKSYGQGKAWGERLAARA--RKLSDSTFWVLSVSLLTRGISDLGVALGAALALTVGA 247

Query: 261 WFGDQAGGQAQDAVAVIVALVLVCRFIDPLQDVASHVEILRGAHGQ--LQEIERILAAKP 318
           W   +         A+++ L+       PL+D+ S +   RG  GQ     I  ++ A P
Sbjct: 248 W---RVAAGDMSVEALLIVLMAGTEIFRPLRDLRSVLH--RGMLGQSAAASIHALMDAWP 302

Query: 319 LPEPASPHRPVGGA-------INLQGVSLRYNPTGPDVLQNVNLHIPAGSMTAVIGASGS 371
           L   A   + V GA       I   GVS  Y+P  P   Q ++L I AG    ++G SG+
Sbjct: 303 LTA-APDAQVVAGAPTRLEPTIEFDGVSFSYSPQRP-AHQGLSLRIAAGERVGIVGPSGA 360

Query: 372 GKTSLMRLIARFFDTTEGSVRIGGVDVRQMARASLTDTVSQVLQDTWLFQGSIADNIRIG 431
           GK++++RL+ R      G++R+GG+DV ++   +L   ++ V QD  LF G+I DN+R+G
Sbjct: 361 GKSTIVRLLLRECVPQAGTIRVGGLDVNRLDTQTLLSHMALVSQDITLFHGTIDDNLRLG 420

Query: 432 KPDASDAEVLQAAHMAGLGHTLERLRGGLDTSVGEGGAQLSGGERQRVTIARALIRQAPV 491
           +PDA+  +V  AA  A +   +  L  G  T++GE G QLSGG+RQRV IARAL+R AP+
Sbjct: 421 RPDATHEQVRAAARAANIDDFIMALPQGYATAIGERGLQLSGGQRQRVAIARALLRDAPI 480

Query: 492 LLVDEATAALDAENQAVIAQTLHSLHGRCTLVVIAHQLSTVAMADHIVVLDAGQVVEQGT 551
           L++DEA +++D EN+A+I Q L  L    T +++AH+L++V  AD  +VLD G+VVEQG 
Sbjct: 481 LILDEALSSVDTENEALIQQALDRLMAGRTTLILAHRLASVIGADRCLVLDQGRVVEQGP 540

Query: 552 PATLRANGGHYARMLEQR 569
            A L    G Y R++ ++
Sbjct: 541 HAELMRQQGLYHRLMHEQ 558