Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  218 bits (555), Expect = 6e-61
 Identities = 176/583 (30%), Positives = 282/583 (48%), Gaps = 27/583 (4%)

Query: 2   LKTFVRLLGECAPAWRRYLLMTVLYGVFS---------------GLTI--STLAPLMLHL 44
           LK + RLL    P    +LL  V + +F+               GL+   + L P + +L
Sbjct: 14  LKIYFRLLSYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVDGLSNPEAVLFPNVPYL 73

Query: 45  LNSEIHAASAWLVVLAAGLTLCWAWRRQVEKAGISLAVAVLQGGRQHIGAQVAQLPLGWF 104
            + ++  A   L++L A      ++      A +SL++  +   R  +  ++  LP  +F
Sbjct: 74  RDLQLLQAVPLLIILIAAWQGLGSFLGNYFLAKVSLSL--VHDLRVALFNKLLVLPNRYF 131

Query: 105 TPDNTARLGHVITQGTMAVAQLPAHVLTPLISSSVTPLVLLVALFILHPPLGLVALLALP 164
              N+  L   IT     V       +  +I   +T + L   L  ++  L LV +  LP
Sbjct: 132 DNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNWHLTLVMVAILP 191

Query: 165 ALAAVLLFSARLGRRADHAFHQHFAAASQRMVEFAQAQSVLRAFNGEGGGTRLLAQSLER 224
            +A ++  +++  R+            +    E  Q   V+R+F GE    +   Q+ + 
Sbjct: 192 VIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRFGQASQS 251

Query: 225 QRSSGMGLIIRASLSALLNSWAVQATFAALLVAAGLWFGDQAGGQAQDAVAVIVALVLVC 284
                + +    SL   +    + +  AAL+       GD   G   D VA I A  L+ 
Sbjct: 252 NTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLFLRGDSTAG---DLVAYITAAGLLP 308

Query: 285 RFIDPLQDVASHVEILRGAHGQLQEIERILAAKPLPEPASPHRPVGGAINLQGVSLRYNP 344
           + I  L +V+S ++  +G  G     E++  A  +         V G + ++ +S  Y  
Sbjct: 309 KPIRQLSEVSSTIQ--KGLAGAESIFEQLDEAPEVDTGTVEKERVEGRLEVRNLSFTYPG 366

Query: 345 TGPDVLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRIGGVDVRQMARA 404
           T  +VL +++     G M A++G SGSGK++L  LI RF+   +G + + GV++      
Sbjct: 367 TEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLR 426

Query: 405 SLTDTVSQVLQDTWLFQGSIADNIRIGK-PDASDAEVLQAAHMAGLGHTLERLRGGLDTS 463
           +L   VSQV Q   LF  ++A+NI  G    A  A++  AA  A     ++RL  G DT 
Sbjct: 427 NLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTE 486

Query: 464 VGEGGAQLSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAVIAQTL-HSLHGRCTL 522
           VGE G  LSGG+RQR+ IARAL++ AP+L++DEAT+ALD E++  I   L H + GR TL
Sbjct: 487 VGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTL 546

Query: 523 VVIAHQLSTVAMADHIVVLDAGQVVEQGTPATLRANGGHYARM 565
            VIAH+LST+  AD I+V+D G++VE+GT   L A  GHYAR+
Sbjct: 547 -VIAHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHYARL 588