Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Dickeya dianthicola ME23

 Score =  201 bits (510), Expect = 9e-56
 Identities = 146/537 (27%), Positives = 251/537 (46%), Gaps = 7/537 (1%)

Query: 32  LTISTLAPLMLHLLNSEIHAASAWLVVLAAGLTLCWAWRRQVEKAGIS-LAVAVLQGGRQ 90
           L +S L PL+         +   W+ +   GL +       +    ++ ++  V+   R+
Sbjct: 43  LMLSLLKPLLDDGFGKADRSVLVWMPLAIIGLMIMRGISSYISSYCVAWVSGKVVMNMRR 102

Query: 91  HIGAQVAQLPLGWFTPDNTARLGHVITQGTMAVAQLPAHVLTPLISSSVTPLVLLVALFI 150
            + + +  +P+ +F   +T  L   IT  +  VA   ++ L  ++    + + L V +F 
Sbjct: 103 RLFSHIMGMPVSFFDQQSTGTLLSRITYDSEQVAASSSNALVTVVREGASIIGLFVLMFW 162

Query: 151 LHPPLGLVALLALPALAAVLLFSARLGRRADHAFHQHFAAASQRMVEFAQAQSVLRAFNG 210
               L L+ +L  P ++  +   ++  R    +        +    +  +    +  F G
Sbjct: 163 YSWQLSLILVLIAPIVSYSMRVVSKRFRSISKSMQNTMGQVTTSAEQMLKGHKEVLIFGG 222

Query: 211 EGGGTRLLAQSLERQRSSGMGLIIRASLSALLNSWAVQATFAALLVAAGLWFGDQAGGQA 270
           +            R R  GM ++  +S+S  +         A +L AA       +  + 
Sbjct: 223 QTVEVERFDAVSNRMRQQGMKMVSASSISDPVVQLIASLALAFVLYAASF----PSVMET 278

Query: 271 QDAVAVIVALVLVCRFIDPLQDVASHVEILRGAHGQLQEIERILAAKPLPEPASPHRP-V 329
             A  + V    +   + PL+ + +     +      Q +  IL  +   +  +      
Sbjct: 279 LTAGTITVVFSSMFTLMRPLKSLTNVNAQFQRGMAACQTLFTILDMEQEKDTGTRVLAHA 338

Query: 330 GGAINLQGVSLRYNPTGPDVLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTEG 389
            G I  + V+  Y       L+N++LHIP G   A++G SGSGK+++  LI RF+D   G
Sbjct: 339 KGNIEFRQVNFTYPGKETLALKNISLHIPPGKTVALVGRSGSGKSTIANLITRFYDIQAG 398

Query: 390 SVRIGGVDVRQMARASLTDTVSQVLQDTWLFQGSIADNIRIGKPDA-SDAEVLQAAHMAG 448
            + + G D+R    +SL   V+ V Q+  LF  +IA+NI     D  S  ++ +AA MA 
Sbjct: 399 EILLDGHDLRDYTLSSLRSQVALVSQNVHLFNDTIANNIAYACGDRYSREDIERAAKMAH 458

Query: 449 LGHTLERLRGGLDTSVGEGGAQLSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAV 508
               + RL  GLDT +GE G  LSGG+RQR+ IARAL+R  P+L++DEAT+ALD E++  
Sbjct: 459 AMDFIGRLEQGLDTVIGENGVLLSGGQRQRIAIARALLRDCPILVLDEATSALDTESERA 518

Query: 509 IAQTLHSLHGRCTLVVIAHQLSTVAMADHIVVLDAGQVVEQGTPATLRANGGHYARM 565
           I   L  L    T +VIAH+LST+  AD I+V++ GQ++E+G  + L A  G YA++
Sbjct: 519 IQAALDELQKNRTALVIAHRLSTIEKADEILVVEDGQIIERGQHSELLARNGAYAQL 575