Pairwise Alignments

Query, 460 a.a., putative amino acid transporter from Pseudomonas putida KT2440

Subject, 469 a.a., GABA permease from Pseudomonas simiae WCS417

 Score =  109 bits (273), Expect = 2e-28
 Identities = 115/458 (25%), Positives = 196/458 (42%), Gaps = 33/458 (7%)

Query: 22  STGRFRKSMSMTALVLFGLAYMVPLAVFTTYGLVTQMTKGHLPTAYLLTLAAMLLTAYSY 81
           S G+  +      + +  +A ++   +F   G         +  AYL +   ++L     
Sbjct: 9   SNGQLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVLVMRML 68

Query: 82  GRMVQAHPYSGSVYTYTRKAFGSHIGFITGWTLLLDYIFLPLLSYLLIGIYMSEYFPTIH 141
           G M  A+P +GS  TY  +A G   GF  GW     ++ +  +  L  G  ++++FP I 
Sbjct: 69  GEMAVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQID 128

Query: 142 AWVWVAGSIALVTFLNLIGIESITRVNWILVVVQLVFIIVFVALSILKLSG--QAEPVSL 199
           AW++   SI L+   NL  +       +   + +++ II F+ L    L G      VS 
Sbjct: 129 AWLFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWIPEREVSG 188

Query: 200 LAPL--HHDGFS---VPLIMTGAAVLCLSFLGFDAVSTMAEETSNPTYRIPVAILAVSLI 254
           L+ L   H GF+   +  ++     +  SF+G +AV+  A E+SNP   I  A  +V   
Sbjct: 189 LSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRSVMWR 248

Query: 255 GGLLFLVVSYCAQMVFPDWGSFADPDSASV-------DVMRRVGGELLVTAFTATYVAGC 307
            G+ +L+  +    V P W    DP  ASV       ++M     +LLV       VA C
Sbjct: 249 IGVFYLLSIFVVISVVP-WN---DPLLASVGSYQRALELMNIPHAKLLVDVVVLIAVASC 304

Query: 308 FASAMVSQASVSRVLFAMGRDGALPRAFGQLVTKKRVPATAILVVSLLSLIALVITLDTV 367
             S++      SR+LF++G+ G  P A  +  +   VP  A++  ++L     + +    
Sbjct: 305 MNSSIY---IASRMLFSLGKRGDAP-ALMKKTSAASVPRAAVIASTILGAGVTLFSYFAP 360

Query: 368 ANMISFGALFAFSAVNLAVVKHYLVDQ----KLRGCRNCLL---YGAIPGLGFLSTLWLW 420
           A +  F  L +  A+ L V     V Q    K+   RN  L       P L +L   ++ 
Sbjct: 361 AGLFQF-LLASSGAIALLVYLVIAVSQLRMRKILRQRNVTLTFQMWLFPWLTWLVIAFIC 419

Query: 421 SSLTSLSFTIGLCW---MGLGLLVLLGLTRALRVKLPE 455
           ++LT +  T    +     +GL +++ L   L  + PE
Sbjct: 420 AALTVMLVTPEHRFEVSSTIGLALVISLVGLLTARQPE 457