Pairwise Alignments

Query, 460 a.a., putative amino acid transporter from Pseudomonas putida KT2440

Subject, 520 a.a., Uncharacterized amino acid permease, GabP family from Sphingobium sp. HT1-2

 Score =  115 bits (287), Expect = 4e-30
 Identities = 108/469 (23%), Positives = 198/469 (42%), Gaps = 56/469 (11%)

Query: 28  KSMSMTALVLFGLAYMVPLAVFTTYGLVTQMTKGHLPTAYLLTLAAMLLTAYSYGRMVQA 87
           +S+    L + G+  ++   +F       Q     +  ++++      + A  Y  M   
Sbjct: 23  RSLGAFQLTMLGIGAVIGTGIFVLTAEAAQKAGPGMMLSFVIAGFVCAVAALCYAEMAAM 82

Query: 88  HPYSGSVYTYTRKAFGSHIGFITGWTLLLDY-IFLPLLSYLLIGIYMSEYFPTIHAWV-- 144
            P SGS YTY+    G  I ++ GW L+L+Y +    +S    G  +     T H  +  
Sbjct: 83  VPVSGSAYTYSYAVMGELIAWMVGWALILEYAVAAGAVSVGWSGYVVGLIEHTFHLDIPD 142

Query: 145 ------WVAGSI--------ALVTFLNLIGIESITRVNWILVVVQLVFIIVFVALSILKL 190
                 +  G +        +LVT+L +IG +    VN +LV +++  + +F+ LS+  +
Sbjct: 143 LLTRGPFDGGMVNLPAMLIASLVTWLLVIGTKESATVNAVLVAIKVSALTLFIVLSVPVM 202

Query: 191 SGQAEPVSLLAPLHHDGFSVPLIMTGAAVLCLSFLGFDAVSTMAEETSNPTYRIPVAILA 250
           + +        P    GFS   +   AA +  +++GFDAVST AEET NP   +P+ ++ 
Sbjct: 203 NMKG-----FTPFMPLGFSG--VSAAAASIFFAYVGFDAVSTAAEETKNPQRNMPIGLIG 255

Query: 251 VSLIGGLLFLVV------SYCAQMVFPDWGSFADPDSASVD------------------- 285
              I  + +++V      +  AQ V+   G    P S ++                    
Sbjct: 256 SLAICTIFYMLVAAGVIGTVGAQPVYGPAGEVLAPGSTALSQQCAALAAAGTEAVTCSKE 315

Query: 286 ----VMRRVGGELLVTAFTATYVAGCFASAMVSQASVSRVLFAMGRDGALPRAFGQLVTK 341
                +R +G   +             +  ++     +R+ F M RDG LP  F ++   
Sbjct: 316 ALAWTLREIGWPQIGNLLGLAAGLALPSVILMMMFGQTRIFFVMSRDGLLPELFSKVHPT 375

Query: 342 KRVP-ATAILVVSLLSLIALVITLDTVANMISFGALFAFSAVNLAVVKHYLVD-QKLRGC 399
            + P    IL    ++L A    +  +A++ + G LFAF+AV++AV++    D  + R  
Sbjct: 376 YKTPHVITILTGIFVALFAAFFPVGILADISNSGTLFAFAAVSIAVMRLRKTDADRKRPF 435

Query: 400 RNCLLYGAIPGLGFLSTLWLWSSLTSLSFTIGLCWMGLGLLVLLGLTRA 448
           R   +Y   P +      +L+ SL   +  + + W  LGL+V    +R+
Sbjct: 436 RTPAIYITAP-IAIAGCAYLFWSLGVETKLMFVGWATLGLIVYFAYSRS 483