Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., HTH-type transcriptional regulator CynR from Xanthobacter sp. DMC5

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 87/303 (28%), Positives = 135/303 (44%), Gaps = 28/303 (9%)

Query: 6   LRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLF--IRHHAQGVSLTP 63
           LR L+ FV  V  G  + A++ L   QP++S A+K LE+  GV L   I H +Q   LT 
Sbjct: 3   LRTLRAFVEVVRQGGFSPAAKVLNATQPTVSKAVKQLEDELGVPLLDRIGHRSQ---LTA 59

Query: 64  SGKRFYAKTKSLLQ-----MAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFR 118
           +G+  Y +  +LL      +A   +   L       G   +G     APL+     A FR
Sbjct: 60  AGEIVYRRALTLLAEREGLVAELEDLRGLRRGSLRLGLPPLGASTLFAPLF-----AVFR 114

Query: 119 QRYPGVDIRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDG----TIEAEPLMPPQKPYVLL 174
            RYPG++IRL +   + L + L  G  +LA       DG     +  EPLM       +L
Sbjct: 115 SRYPGIEIRLTEHGSKRLEEMLLEGEVELAGSLLPAKDGFDGQAVRCEPLM------AVL 168

Query: 175 PENHRFASQAQVSLRDLCPEPMILLDVAPSRTYFV-SLFNEMGLAPNIVFSSPSIEMVRG 233
           P +H  A + +V++ DL   P IL +   +    +       G +P +   S  I+ +  
Sbjct: 169 PVSHPLAGRERVTIADLADFPFILFEGGFALNQVLEDACARNGFSPQVAARSGQIDFIVE 228

Query: 234 MVGQGFGFSLLVTRPHSEYTYDGQRLAMLDIAEPVALSGLAAAWLKRVQLTKPAQLFVEF 293
           + G G G + L      +      RL+  ++AEP     +A  W K   L+  A+ ++E 
Sbjct: 229 IAGAGLGVAFLPKTIAYQRRTPAVRLS--ELAEPGTEWHMAIVWRKGSYLSHAARAWLEL 286

Query: 294 CRE 296
            RE
Sbjct: 287 TRE 289