Pairwise Alignments

Query, 558 a.a., Metabolite MFS transporter, MHS family from Pseudomonas putida KT2440

Subject, 438 a.a., shikimate transporter from Escherichia coli ECRC101

 Score =  209 bits (533), Expect = 1e-58
 Identities = 121/345 (35%), Positives = 193/345 (55%), Gaps = 18/345 (5%)

Query: 4   LDSTSTGSAP-QRGIT-KEERKVIFASSLGTVFEWYDFYLYGSLAAIIA-RHFFAGVNET 60
           +DST   + P +R ++    R+    S  G V +WYDF LYG  AA++  R FF  V+  
Sbjct: 1   MDSTLISTRPDERTVSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA 60

Query: 61  TSFIFALLAFAAGFAVRPFGAIVFGRLGDMIGRKYTFLITIVIMGLSTAVVGLLPGYATI 120
              + A   F  GF  RP G ++FG  GD +GRK   ++T+ +MG++TA++G+LP ++TI
Sbjct: 61  MGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTI 120

Query: 121 GVAAPIILITLRLLQGLALGGEYGGAATYVAEHAPKGRRGFFTAWIQTTATLGLFLSLLV 180
           G  API+L+TLR +QG A+GGE+GGAA    E APK ++ F+++ +Q    +GL LS  +
Sbjct: 121 GWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGL 180

Query: 181 IMACRTAMGTEAFEAWGWRIPFLLSILLLAISVYIRLQLNESPVFMKMKAEGKASK--AP 238
           +         E F +WGWRIPFL SI+L+  ++++R  + ES  F + +    A+K   P
Sbjct: 181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQYNQAAAKKRIP 240

Query: 239 LTESFARWDN--LKVVIMSLLGGTAGQAVVWYTGQFYALFFLLQTLKIEAQ---TANLLI 293
           + E+  R     LK++ + L      + +  Y    +AL +  Q + +  +      LL+
Sbjct: 241 VIEALLRHPGAFLKIIALRLC-----ELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLV 295

Query: 294 AGSLLIGTPFFIFFGSLSDRIGRKKIIMAGCIIAALTYFPIFKAL 338
            G   +  P F +   L+DR GR+++ + G +I  L+ FP F AL
Sbjct: 296 GGLSCLTIPCFAW---LADRFGRRRVYITGALIGTLSAFPFFMAL 337



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 462 LLLLTILVIYVTMVYGPIAAWLVELFPARIRYTSMSLPYHIGNGWFGGFLPTVAFAMVAA 521
           ++L  I    V  V  P+     E+F A  RY+   + Y + +   GGF P +A A++  
Sbjct: 350 IMLANIAHDMVVCVQQPM---FTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALIT- 405

Query: 522 TGDIYYGLWYPIVIAVMTAVL 542
               + G W+ + I ++   L
Sbjct: 406 ---YFAGNWHSVAIYLLAGCL 423