Pairwise Alignments

Query, 823 a.a., putative helicase, UvrD/REP family from Pseudomonas putida KT2440

Subject, 637 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 17/99 (17%)

Query: 536 HLMIDEFQDVSPQIVSWLRACLAEIRRRGPAMHTGRHAQHSSLLCVGDDWQSIYGWRGSS 595
           HL+IDE+QD++P     LR   +E  R               L  VGDD Q +Y WR + 
Sbjct: 223 HLLIDEYQDINPAQERMLRLLRSEGAR---------------LWAVGDDDQCLYAWRSAD 267

Query: 596 PKYFMEFTKAFPSPANTRVMLVDNYRCQQQVIDAAEHLV 634
           P + + F  A+P PA  R  L  NYR    +++AA  L+
Sbjct: 268 PAFILGFETAWPDPALFR--LSRNYRSSATIVNAAGALI 304



 Score = 30.0 bits (66), Expect = 4e-04
 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 26/93 (27%)

Query: 694 ALMNEHLQSVLHAEAALPAEQRRLRQLTYHSAKGLQADAVFMLGDCQYLTSSPYKNQVYR 753
           ALM E  +S+  AE+   A    +   T H AKGL+  AV + G C+             
Sbjct: 487 ALMEEQRRSLRRAESGGDA----VVLSTIHGAKGLEWSAVVVAG-CE------------- 528

Query: 754 QAGLGKAGDAQPFDTAQK-EEVQRLAYVAVTRA 785
                   D  P +++   EE +RL YVA TRA
Sbjct: 529 -------ADLMPHESSPDLEEERRLMYVAATRA 554



 Score = 28.1 bits (61), Expect = 0.002
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 13/76 (17%)

Query: 117 DVAQRLPAEAQPSAAQWKLIFSDTPSTCVVAGAGAGKSTSLVLRILLLRHYLGYELDAMT 176
           D  QRL AEA+              S  V+AG G GK+T+LV R + L    G     + 
Sbjct: 14  DPEQRLAAEAEAD------------SVLVLAGPGTGKTTTLVGRYVHLLEQ-GAAPARIF 60

Query: 177 VVTFTRESRKDFIKRL 192
           V TFT  + ++   R+
Sbjct: 61  VSTFTARAAEELRGRI 76