Pairwise Alignments

Query, 823 a.a., putative helicase, UvrD/REP family from Pseudomonas putida KT2440

Subject, 674 a.a., DNA helicase Rep from Serratia liquefaciens MT49

 Score = 52.8 bits (125), Expect = 7e-11
 Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 28/210 (13%)

Query: 471 AMSFPSGDSDALFFEALALYWKALEA-HLLDQSPPVMSYNRMFALFGENNPENLHLLPDP 529
           AM     + D LF     LY   + A ++LD    ++    +  L  + N E    + + 
Sbjct: 152 AMELARSERDKLFAHCYGLYHAHMRACNVLDFDDLIL----LPTLLLQRNEE----VRER 203

Query: 530 LLRPLAHLMIDEFQDVSPQIVSWLRACLAEIRRRGPAMHTGRHAQHSSLLCVGDDWQSIY 589
               + +L++DE+QD +      ++  +    R                  VGDD QSIY
Sbjct: 204 WQNRIRYLLVDEYQDTNTSQYELVKLLVGNRAR---------------FTVVGDDDQSIY 248

Query: 590 GWRGSSPKYFMEFTKAFPSPANTRVMLVDNYRCQQQVIDAAEHLVKGTPAIAGKKARAS- 648
            WRG+ P+  +   + F  PA   + L  NYR  ++++ AA  L+   P +  K+  +  
Sbjct: 249 SWRGARPQNLVLLKEDF--PALQVIKLEQNYRSSERILKAANILIANNPHVFEKRLFSEL 306

Query: 649 GPAAELPGSPVKVFDRD-EAALGETLVEHY 677
           G   EL        D + E  +GE +  H+
Sbjct: 307 GYGEELKVVTANNEDHEAERVVGELIAHHF 336



 Score = 39.7 bits (91), Expect = 6e-07
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 8/81 (9%)

Query: 145 VVAGAGAGKSTSLVLRILLLRHYLGYELDAMTVVTFTRESRKDFIKRLLQVFALWQINLQ 204
           V+AGAG+GK+  +  +I  L H  GY+   +  VTFT ++ ++  +R+ Q        + 
Sbjct: 20  VLAGAGSGKTRVITNKIAHLIHNCGYQARHIAAVTFTNKAAREMKERVAQ-------TMG 72

Query: 205 PVQAREL-VRTFHSRILPLVR 224
             +AR L + TFH+  L +++
Sbjct: 73  RKEARGLMISTFHTLGLEIIK 93



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 17/73 (23%)

Query: 713 EQRRLRQLTYHSAKGLQADAVFMLGDCQYLTSSPYKNQVYRQAGLGKAGDAQPFDTAQKE 772
           E  +++ +T H++KGL+   VF++G  + L   P+++ +               D    +
Sbjct: 548 ELDQVQLMTLHASKGLEFPYVFLVGMEEGLL--PHQSSI---------------DEDNVD 590

Query: 773 EVQRLAYVAVTRA 785
           E +RLAYV +TRA
Sbjct: 591 EERRLAYVGITRA 603