Pairwise Alignments

Query, 823 a.a., putative helicase, UvrD/REP family from Pseudomonas putida KT2440

Subject, 684 a.a., DNA helicase IV (NCBI) from Escherichia coli BW25113

 Score = 70.1 bits (170), Expect = 4e-16
 Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 36/264 (13%)

Query: 531 LRPLAHLMIDEFQDVSPQIVSWLRACLAEIRRRGPAMHTGRHAQHSSLLCVGDDWQSIYG 590
           + P  H+++DEFQD+SPQ      A LA +R++            ++L  VGDDWQ+IY 
Sbjct: 428 ISPWKHILVDEFQDISPQ----RAALLAALRKQN---------SQTTLFAVGDDWQAIYR 474

Query: 591 WRGSSPKYFMEFTKAFPSPANTRVMLVDNYRCQQQVIDAAEHLVKGTPAIAGKKARASGP 650
           + G+       F + F      R  L   YR   ++ + A   ++  P   G+  +    
Sbjct: 475 FSGAQMSLTTAFHENFGE--GERCDLDTTYRFNSRIGEVANRFIQQNP---GQLKKPLNS 529

Query: 651 AAELPGSPVKVFDRDEA-ALGETLVEHYQRGETVMMLYRKGSDRALMNEHLQSVLHAEAA 709
                   V + D  +  AL + L  + +  E +++L R          H++     +AA
Sbjct: 530 LTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILAR--------YHHMRPASLEKAA 581

Query: 710 LPAEQRRLRQLTYHSAKGLQADAVFMLGDCQYLTSSP--YKNQVYRQAGLGKAGDAQPFD 767
               + ++  +T H++KG QAD V ++G  +     P   +  +  +A L       P +
Sbjct: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL------PPVE 635

Query: 768 TAQKEEVQRLAYVAVTRAVQHCYW 791
                E +RL YVA+TRA +H  W
Sbjct: 636 DFPDAEERRLMYVALTRA-RHRVW 658



 Score = 30.8 bits (68), Expect = 3e-04
 Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 125 EAQP-SAAQWKLIFSDTPSTCVVAGAGAGKSTSLVLRILLLRHYLGYELDAMTVVTFTRE 183
           E+ P + AQ + + +   S  V+AGAG+GK++ LV R   L        + + ++ F R+
Sbjct: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252

Query: 184 SRKDFIKRLLQVFALWQINLQPVQARELVRTFHSRILPLVR 224
           + ++  +R+ +     +++ + + A    RTFH+  L +++
Sbjct: 253 AAEEMDERIRE-----RLHTEDITA----RTFHALALHIIQ 284