Pairwise Alignments
Query, 923 a.a., putative Antibiotic biosynthesis protein from Pseudomonas putida KT2440
Subject, 4293 a.a., peptide synthase from Pseudomonas simiae WCS417
Score = 266 bits (681), Expect = 2e-74
Identities = 192/576 (33%), Positives = 275/576 (47%), Gaps = 18/576 (3%)
Query: 13 EYRAEQPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVV 72
E+R +Q IH F QQ + A A+ T SY +L+ + +A L + RV
Sbjct: 2159 EHRLDQCIHPLFSQQVAVRGDAPALTFAGVTLSYRELDARANRLAWMLRERGVGPQVRVG 2218
Query: 73 IVSRRSAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDVGQP 132
+ RS +V +L L+AG A+ D YP R+ ++ ++L A +G+
Sbjct: 2219 LALPRSLEMVIGLLAILKAGGAYVPLDPEYPLDRLHYMIEDSGIGLLLSDAAMFEALGEL 2278
Query: 133 MVVTVPEALAEALQAFPRQPV-ALPAVS-PEQPAYITFTSGSTGEPKGIVTHHAPLVHFI 190
L + L P ALP +S P+ AY+ +TSGSTG+PKG+V H +
Sbjct: 2279 PATVACWCLEDDLPVLANYPADALPFISLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHC 2338
Query: 191 DWHVRQHGFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWLHQ 250
+ + G D + D + PL GA + AQ + + +
Sbjct: 2339 AAVIERFGMRADDCELHFYSINFDAATERLLVPLLSGAQVVLRAQGQW-DAEEICGLIRT 2397
Query: 251 HGVSVIHLTPPLGKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQVRAIAPNAVNVNF 310
HG++++ TP G + Q L +R GG+AL+ Q++RA V N
Sbjct: 2398 HGINILGFTPSYGSQLAQWLATRQQTLP-VRMCITGGEALTGEHLQRIRAAFQPQVFFNA 2456
Query: 311 YGTTETPQAMAFHTLDPEM---DNARVPLGKGIADAQLLVINPANQLVSEGETGEILIRS 367
YG TET M +L PE A VP+G I D +++ LV +G TGE+ +
Sbjct: 2457 YGPTETV-VMPLASLAPEHLEEGAASVPIGSIIGDRVAYILDADLALVPQGATGELYVGG 2515
Query: 368 PYLSRGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRG 427
L++GY PG+T +F+A+PF A R YRTGDL DG +LGR D QVKIRG
Sbjct: 2516 AGLAQGYHQRPGMTAERFVADPF-ARNGGRLYRTGDLVRQRVDGLVEYLGRIDHQVKIRG 2574
Query: 428 HRIELAEIENAICRHPHIGQCVVLTNHEGASTRLVAYCV--AQQAIRADELRQALSGQLP 485
RIEL EIE + H + + VVL + +LVAY V A+ D L+ L LP
Sbjct: 2575 FRIELGEIETRLLEHDAVREAVVLALDAPSGKQLVAYLVSDAEHVALRDALKAHLKAHLP 2634
Query: 486 DYMVPALFVFLDALPLTPNAKVDKRALPAAFDDSIN-----PPLSPLAEKLSTAWARILQ 540
DYMVPA + LD++PLT N K+D+RALP D N P + L L+ W +L
Sbjct: 2635 DYMVPAHLIVLDSMPLTANGKLDRRALPQP-DPEANRQHYVAPRNELESTLAAIWCAVLN 2693
Query: 541 VPRLDARLSFVELGGDSLSFVQ-ASRVLEALIGHLP 575
V ++ +F ELGGDS+ +Q SR +A I P
Sbjct: 2694 VQQVGLDDNFFELGGDSILSIQVVSRARQAGIHFSP 2729
Score = 231 bits (590), Expect = 6e-64
Identities = 171/546 (31%), Positives = 260/546 (47%), Gaps = 17/546 (3%)
Query: 36 AIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVVIVSRRSAALVYAMLGCLRAGLAF 95
A++ + +++QL + +A +L V I + RS L+ +L ++AG A+
Sbjct: 1134 ALVWDGGSLTFAQLHTQANRLAHYLRDKGVGPDVCVAIAAERSPQLLIGLLAIIKAGGAY 1193
Query: 96 TVADAAYPAARIEQIVNTLKPAVILRCAEASVDVGQPMVVTVPEALAEALQAFPRQPVAL 155
D YP R+ ++ ++L V V V + L ++P QP L
Sbjct: 1194 VPLDPDYPTERLAYMLKDSGVHLLLTQTALLEQVPAACGVCVIAMDSLHLDSWPTQPPGL 1253
Query: 156 PAVSPEQPAYITFTSGSTGEPKGIVTHHAPLVHFIDWHVRQHGFTQADTFSLLSGLGHDP 215
+ + AY+ +TSGSTG+PKG+ HA L + W + + D + + D
Sbjct: 1254 H-LHGDNLAYVIYTSGSTGQPKGVGITHAALAERLQWMQATYPLNETDVLMQKAPISFDV 1312
Query: 216 VYRDVFTPLSLGATIACPAQSTLTEPSRLASWLHQHGVSVIHLTPPLGKLIETGAHLNGQ 275
+ F PL G + +P R+A + +HGV+ +H PPL +L L +
Sbjct: 1313 SVWECFWPLITGCRLVLAGPGEHRDPHRIAQLVQEHGVTTLHFVPPLLQLF-IDEPLVAE 1371
Query: 276 ILDHLRYLFWGGDALSPTQYQQVRAIAPNAVNVNFYGTTETPQAMAFHTLDPEMDNARVP 335
LR LF GG+AL +V A P N YG TET + E D R P
Sbjct: 1372 CTS-LRRLFSGGEALPAELRNRVLAQLPAVQLHNRYGPTETAINVTHWHCRAE-DGERSP 1429
Query: 336 LGKGIADAQLLVINPANQLVSEGETGEILIRSPYLSRGYWDDPGLTEAKFIANPFTADTA 395
+G+ + + V++ V G GE+ I L+RGY GLT +F+A+ A
Sbjct: 1430 IGRPLGNVICRVLDEQLNPVPLGVPGELCIGGIGLARGYLGRAGLTAERFVADHQGA--- 1486
Query: 396 DRCYRTGDLGTYLADGSARFLGRADSQVKIRGHRIELAEIENAICRHPHIGQCVVLTNHE 455
R YRTGD + ADG +LGR D QVK+RG R+E EIE + I Q VVL
Sbjct: 1487 -RLYRTGDRARWSADGVIEYLGRLDQQVKLRGFRVEPEEIEARMLALEGIAQAVVLVR-- 1543
Query: 456 GASTRLVAYCVAQQAIRADELRQALSGQLPDYMVPALFVFLDALPLTPNAKVDKRALPA- 514
+L+ Y A + +++ AL+ +LP+YMVPAL + LDA+PL+P+ K+D+RALP
Sbjct: 1544 --DGQLIGYFTAHGDLDEQQVKTALAAELPEYMVPALLMRLDAMPLSPSGKLDRRALPEP 1601
Query: 515 --AFDDSINPPLSPLAEKLSTAWARILQVPRLDARLSFVELGGDSLSFVQ-ASRVLEALI 571
+ + P +PL ++++ W +L +P + R F LGG SL Q SR +A
Sbjct: 1602 VWQVREHVEPE-TPLQQQIAAIWREVLGLPSIGLRDDFFALGGHSLLATQIISRTRQACD 1660
Query: 572 GHLPER 577
LP R
Sbjct: 1661 VELPLR 1666
Score = 229 bits (583), Expect = 4e-63
Identities = 181/595 (30%), Positives = 281/595 (47%), Gaps = 29/595 (4%)
Query: 13 EYRAEQPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVV 72
+Y E+ F +Q + P IA +Y +L + S G+ L+ V
Sbjct: 3681 DYPLERSYIELFEEQVAAHPQRIAASCLDQQWTYDELNRRSNGLGHALIAAGVGLDQPVA 3740
Query: 73 IVSRRSAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDVGQP 132
+++ R+ L+ ++G +AG + D P+ R+ I++ L +L C EAS +
Sbjct: 3741 LLAERNLDLLGMIIGSFKAGAGYLPLDPGLPSQRLRSILD-LSRTPLLVCTEASREQAIE 3799
Query: 133 MVVTVPEALA--EALQAFPRQPVALPAVSPEQPAYITFTSGSTGEPKGIVTHHAPLVHFI 190
++ L E + A P A P+ AY+ +TSGSTG PKG++ +++
Sbjct: 3800 LLDGFDCQLLVWEEIPARGENPGVYSA--PDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQ 3857
Query: 191 DWHVRQHGFTQADTFSLLSGLGHD-PVYRDVFTPLSLGATIACPAQSTLTEPSRLASWLH 249
V + AD + + D V++ + PL GA + + +P L +
Sbjct: 3858 LSKVPYLALSDADVIAQTASQSFDISVWQFLAAPL-FGARVDIVPNTIAHDPQGLLEHVQ 3916
Query: 250 QHGVSVIHLTPPL--GKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQVRAIAPNAVN 307
G++V+ P L G L + L+G LR++ G+A+ P Q P
Sbjct: 3917 AQGITVLESVPSLIQGMLAQDRIGLDG-----LRWMLPTGEAMPPELAHQWLQRYPEIGL 3971
Query: 308 VNFYGTTETPQAMAFHTLD-PEMDNARVPLGKGIADAQLLVINPANQLVSEGETGEILIR 366
VN YG E +AF+ +D +P+G + +L +++ A +LV +G GE+ +
Sbjct: 3972 VNAYGPAECSDDVAFYRVDLASTRGTYLPIGTPTDNNRLYLLDGALELVPQGAVGELCVA 4031
Query: 367 SPYLSRGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIR 426
+ RGY DP T F+ NPF A +R YRTGDL +DG ++GR D QVKIR
Sbjct: 4032 GTGVGRGYVSDPLRTAPVFVPNPFGAP-GERLYRTGDLARRRSDGVLEYVGRVDHQVKIR 4090
Query: 427 GHRIELAEIENAICRHPHIGQCVVLTNHEGASTRLVAYCVA-----QQAIRADELRQALS 481
G+RIEL EIE + P + V LV Y VA + R D ++Q L
Sbjct: 4091 GYRIELGEIEARLHEQPEVRDAAVGVQEGMNGKHLVGYLVAADEALNPSERLDRIKQRLR 4150
Query: 482 GQLPDYMVPALFVFLDALPLTPNAKVDKRALPAAFDDSIN-----PPLSPLAEKLSTAWA 536
+LP+YMVP +++LD LPL N K+D++ALPA + P + L L+ WA
Sbjct: 4151 AELPEYMVPLHWLWLDRLPLNANGKLDRKALPALEIGQLQSQDYLAPRNELEATLAAIWA 4210
Query: 537 RILQVPRLDARLSFVELGGDSLSFVQ-ASRVLEALIGHLPER--WETLPVCQLAE 588
+L+V R+ + +F ELGG SL Q ASRV + L +P R +E V +LAE
Sbjct: 4211 EVLKVERVGVQDNFFELGGHSLLATQIASRVQKTLQRDVPLRAMFECSTVAELAE 4265
Score = 67.0 bits (162), Expect = 2e-14
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 41/285 (14%)
Query: 318 QAMAFHTLDPEMDNARVPLGKGIADAQLLVINPANQL-VSEGETGEILIRSPYLSRGYWD 376
QA+A + +P +A + G + +L+ +P + + GE+ P ++ GYW
Sbjct: 347 QALAANRAEPGQGSAIMSCGTRQPEHAVLIADPHTLAELPDNHVGELWATGPSIAHGYWR 406
Query: 377 DPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRGHRIELAEIE 436
+P T A F R RTGDLG ++ DG GR + +RGH + +IE
Sbjct: 407 NPEAT-----AKTFVQHAGRRWLRTGDLG-FIRDGEVYITGRLKDLLIVRGHNLYPQDIE 460
Query: 437 NAICRHPHIGQ----CVVLTNHEGAS--------TRLVAYCVAQQAIRADELRQALSGQL 484
I R + + N +G +R V +A +A+ +RQA++
Sbjct: 461 QTIEREVEVVRKGRVAAFAVNEQGLEGIGIAAEISRSVQKILAPEAL-IKAIRQAVAEAY 519
Query: 485 PDYMVPALFVFLD--ALPLTPNAKVDKRALPAAF-DDSIN-----PPL----------SP 526
+ P++ V L+ ALP T + K+ + A D S++ P L S
Sbjct: 520 QE--APSVVVLLNPGALPKTSSGKLQRAACGLRHKDGSLDSYAQFPNLHAQEGDGALESE 577
Query: 527 LAEKLSTAWARILQVPRLDARLSFVELGGDSLSFVQ-ASRVLEAL 570
L +++ W LQV + A F LGG+S++ Q +R+ E+L
Sbjct: 578 LHNQIAAIWCEQLQVATVAADDHFFLLGGNSITATQVVARLRESL 622
Score = 58.2 bits (139), Expect = 1e-11
Identities = 51/151 (33%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 45 SYSQLEQISAGIAAFLVKNAASGTDRVVIVSRRSAALVYAMLGCLRAGLAFTVADAAYPA 104
SY L+Q + IAA L NA G DR V++ V A GCL AG+ +A AYP
Sbjct: 42 SYRDLDQRARTIAAALQANADLG-DRAVLLFPSGPDYVAAFFGCLYAGV---IAVPAYPP 97
Query: 105 --------ARIEQIVNTLKPAVILRCAEASVDVGQPMVVTVPEALAEALQAFPRQPVALP 156
AR+ I++ +P ++L A S+ G + P L+ VA P
Sbjct: 98 ESTRRHHQARLLSIISDAEPRLLLTIA--SLADGLSQLENAPPVLSVDRLEGAGNWVA-P 154
Query: 157 AVSPEQPAYITFTSGSTGEPKGIVTHHAPLV 187
+ P+ A++ +TSGST PKG+ H LV
Sbjct: 155 DLHPDDIAFLQYTSGSTALPKGVQVSHGNLV 185