Pairwise Alignments
Query, 923 a.a., putative Antibiotic biosynthesis protein from Pseudomonas putida KT2440
Subject, 4679 a.a., peptide synthase from Pseudomonas simiae WCS417
Score = 255 bits (651), Expect = 5e-71
Identities = 187/567 (32%), Positives = 287/567 (50%), Gaps = 28/567 (4%)
Query: 12 LEYRAEQPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRV 71
++Y E+ +H F +A P A+A+ + SY +L + + +A L+ A G D +
Sbjct: 3031 VDYPRERCVHTLFEARALAQPDALALQFKGQALSYGELNRRANRLAHRLIA-AGVGPDVL 3089
Query: 72 VIVS-RRSAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDVG 130
V V RS +V +L L+AG A+ D +PA R+ ++ + V+L + +
Sbjct: 3090 VAVHVERSLDMVIGLLATLKAGGAYVPLDPQFPADRLAFMLEDSRARVLLTQSHLDGSLA 3149
Query: 131 QPMVVTV--PEALAEALQAFPRQPVALPAVSPEQPAYITFTSGSTGEPKGIVTHHAPLVH 188
P V V EA A++ P+ V +PE AY+ +TSGSTG PKG++ H L
Sbjct: 3150 HPQGVQVLMVEADDNAVEHDPQVNV-----TPEHLAYVIYTSGSTGTPKGVMVRHEALCS 3204
Query: 189 FIDWHVRQHGFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWL 248
F L+ D +++ PL++GAT+ Q +P + +
Sbjct: 3205 FTCGMAGTLDIGADARVLSLTTFSFDIFALELYVPLTVGATVLLSGQELALDPEAIIDLV 3264
Query: 249 HQHGVSVIHLTPPLGKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQVRAIAPNAVNV 308
H +V+ TP +++ Q+L ++ L GG+AL P+ Q R +
Sbjct: 3265 HSQCANVLQATPSTWRMLLESPR--AQLLRGIKCLC-GGEAL-PSDLAQ-RLLDLQGPLW 3319
Query: 309 NFYGTTETPQAMAFHTLDPEMDNARVPLGKGIADAQLLVINPANQLVSEGETGEILIRSP 368
N YG TET A H L A+ +G+ IA+ L ++N G GE+LI
Sbjct: 3320 NLYGPTETTIWSAAHRLH----EAQPLVGRPIANTALFILNAGLTPSPVGAAGELLIGGV 3375
Query: 369 YLSRGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRGH 428
L+RGY + P LT +F+ NP+ A +R YRTGDL Y ADG ++GR D QVK+RG
Sbjct: 3376 GLARGYHERPALTAERFVPNPYGAP-GERLYRTGDLARYRADGVVEYIGRVDHQVKVRGF 3434
Query: 429 RIELAEIENAICRHPHIGQCVVLTNHEGASTRLVAYCVAQQAIRADELRQALSGQLPDYM 488
RIEL E+E + I + VVL +++ RL+AY V+ + + AL +LPDYM
Sbjct: 3435 RIELGEVEACLREQAGIREAVVLADND----RLIAYLVSSAPDAPEVYKAALRERLPDYM 3490
Query: 489 VPALFVFLDALPLTPNAKVDKRALPAAFDDSIN----PPLSPLAEKLSTAWARILQVPRL 544
VPA +FLD+LPLTPN K+D++ALPA + P++P ++++ WA +L +P++
Sbjct: 3491 VPAHLMFLDSLPLTPNGKLDRKALPAVDAALLRTGHVAPVTPREQQVAAIWADVLDLPQV 3550
Query: 545 DARLSFVELGGDSLSFVQ-ASRVLEAL 570
F ELGG SL + SRV +AL
Sbjct: 3551 GLDDHFFELGGHSLLATRVVSRVRQAL 3577
Score = 240 bits (613), Expect = 1e-66
Identities = 176/571 (30%), Positives = 271/571 (47%), Gaps = 15/571 (2%)
Query: 20 IHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVVIVSRRSA 79
+H QA+ P A+A+ A SY+QL + +A L+ RV + +RR
Sbjct: 1987 VHERIAAQAAATPDALAVQAGDARLSYAQLNDHANRLAHRLLALGVGPGQRVGLAARRGP 2046
Query: 80 ALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDVGQPMVVTVPE 139
L+ ++L L++G A+ D YP R+ ++ + ++L D+ P + +
Sbjct: 2047 QLIVSLLAVLKSGAAYVPLDPNYPTERLAYMLADSRLDLLLSETGLLADLPLPQGLARLD 2106
Query: 140 ALAEA--LQAFPRQPVALPAVSPEQPAYITFTSGSTGEPKGIVTHHAPLVHFIDWHVRQH 197
A L +P P A A + + AY+ +TSGSTG PKG+ HA L F D
Sbjct: 2107 FTASGAELADYPSTPPANHAAAADL-AYVIYTSGSTGLPKGVAIDHAALSQFCDSAEAYS 2165
Query: 198 GFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWLHQHGVSVIH 257
+ +D + D + PL +GA + L + +LA + + GV++
Sbjct: 2166 RLSASDRVLQFATFSFDGFVEQCYPPLCVGAALIMRGDE-LWDAGQLAREIVEQGVTLAD 2224
Query: 258 LTPPLGKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQVRAIAPNAVN-VNFYGTTET 316
L L+ ++ + L +LR + GG+A+S + V VN YG TE
Sbjct: 2225 LPAAYWYLLAKECAVDRRTLGNLRQVHVGGEAMSVEGLRAWHTAGLGGVRLVNTYGPTEA 2284
Query: 317 PQAMAFHT--LDPEMDNARVPLGKGIADAQLLVINPANQLVSEGETGEILIRSPY-LSRG 373
+ H L D VP+G+ I L V++ +L++ GE+ I + + L++
Sbjct: 2285 TVVSSVHDCQLADASDAFGVPIGRAIEGRALYVLDSGFELLASDGVGELCIGAEHGLAQC 2344
Query: 374 YWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRGHRIELA 433
Y+D P LT +F+ +PF+A R YR+GDL Y G+ ++GR D QVKIRG R+E+
Sbjct: 2345 YFDRPALTAERFLPDPFSAVPGARLYRSGDLARYNEAGALEYVGRIDHQVKIRGFRVEMG 2404
Query: 434 EIENAICRHPHIGQCVVLTNHEGASTRLVAYC--VAQQAIRADELRQALSGQLPDYMVPA 491
EIE ++ P + + V+ T+LVAY V Q + L L LPDYMVP
Sbjct: 2405 EIEASLQALPSLREAAVIAQPSATGTQLVAYVVPVTAQTLDPQALAATLRQSLPDYMVPG 2464
Query: 492 LFVFLDALPLTPNAKVDKRALPA----AFDDSINPPLSPLAEKLSTAWARILQVPRLDAR 547
+V L+ALPL N K+D+RALPA + P +PL +L+ W +LQV ++
Sbjct: 2465 QWVILEALPLNNNGKLDRRALPAPDLNQARQAYLAPQNPLQSRLAAIWQAVLQVEQVGLN 2524
Query: 548 LSFVELGGDSLSFVQ-ASRVLEALIGHLPER 577
F E GG SL Q SRV L +P R
Sbjct: 2525 DHFFERGGHSLLATQVVSRVRHDLKLEVPLR 2555
Score = 233 bits (595), Expect = 2e-64
Identities = 182/566 (32%), Positives = 274/566 (48%), Gaps = 25/566 (4%)
Query: 14 YRAEQPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVVI 73
Y E+ IHH Q P A A++ T +Y+QL+ + +A L + + V I
Sbjct: 507 YPTERGIHHLVEDQVQATPDAPALVFGTTTLTYAQLDARANQLAHALREKGVAPDVLVGI 566
Query: 74 VSRRSAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILR----CAEASVDV 129
RS +V +L L+AG A+ D YP R+ ++ ++L V+
Sbjct: 567 CIERSIEMVVGLLAILKAGGAYVPLDPEYPQERLAYMIEDSGIQLLLSQHSLLPVLPVEG 626
Query: 130 GQPMVVTVPEALAEALQAFPRQPVALPAVSPEQPAYITFTSGSTGEPKGIVTHHAPLVHF 189
Q + + P + + A V+L A++ AY+ +TSGSTG+PKG H LV+
Sbjct: 627 IQVIALDQPASWLDGYSAESAN-VSLHALNL---AYVIYTSGSTGKPKGAGNSHRALVNR 682
Query: 190 IDWHVRQHGFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWLH 249
+ W + +G D + D + F PL GA + A EP+RL +
Sbjct: 683 LCWMQQAYGLDARDAVLQKTPFSFDVSVWEFFWPLMTGARLVVAAPGEHREPARLIETIG 742
Query: 250 QHGVSVIHLTPPLGKLIETGAHLNG-QILDHLRYLFWGGDALSPTQYQQVRAIAPNAVNV 308
+HG++ +H P +++ H G Q L+ + G+AL QV A P A
Sbjct: 743 RHGITTLHFVP---SMLQAFIHEPGVQACTSLQRIVCSGEALPLDAQLQVFAKLPQAGLF 799
Query: 309 NFYGTTETPQAMAFHT-LDPEMDNARVPLGKGIADAQLLVINPANQLVSEGETGEILIRS 367
N YG TE + T +D D+ VP+G+ IA+ V++ V G +GE+ +
Sbjct: 800 NLYGPTEAAIDVTHWTCVDEGADS--VPIGRPIANLGTYVLDAQLNPVPAGVSGELYLGG 857
Query: 368 PYLSRGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRG 427
L+R Y P LT +F+ +PF D A R YRTGD ADG +LGR D QVK+RG
Sbjct: 858 IGLARSYHRRPALTAERFVPSPF-GDGA-RLYRTGDRVRQRADGVIEYLGRLDHQVKLRG 915
Query: 428 HRIELAEIENAICRHPHIGQCVVLTNHEGASTRLVAYCVAQQAIRADELRQALSGQLPDY 487
RIEL EIE + +HP + + VVL +LVAY V + D L+ L LP+Y
Sbjct: 916 LRIELGEIETRLMQHPSVREAVVLVQ---GGKQLVAYLVLEDTAPVD-LKAWLLSSLPEY 971
Query: 488 MVPALFVFLDALPLTPNAKVDKRALP---AAFDDSINPPLSPLAEKLSTAWARILQVPRL 544
MVP+ V L LP+T N K+D++ALP A + P + L + ++ W+ +L V ++
Sbjct: 972 MVPSHMVPLAKLPVTANGKLDRKALPLPDVAPQQAFVAPENDLQKAVAAIWSDVLGVEQV 1031
Query: 545 DARLSFVELGGDSLSFVQ-ASRVLEA 569
+F ELGGDS+ +Q SR +A
Sbjct: 1032 GLDDNFFELGGDSIISIQVVSRARQA 1057
Score = 224 bits (570), Expect = 1e-61
Identities = 170/578 (29%), Positives = 270/578 (46%), Gaps = 29/578 (5%)
Query: 14 YRAEQPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVVI 73
+ A++ +H +A P A+A+ T SY +L++ + +A L+ RV I
Sbjct: 4067 FSAKRLVHELVADRARENPDAVAVKFDAQTLSYGELDRQANRLAHALIARGVGPDVRVAI 4126
Query: 74 VSRRSAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDVGQP- 132
RSA ++ A L ++AG + D YP R+ ++ + ++L A + P
Sbjct: 4127 AMPRSAEIMVAFLAVMKAGGVYVPLDIEYPRDRLLYMMQDSRAQLLLTHTRALQQLPIPD 4186
Query: 133 ----MVVTVPEALAEALQAFPRQPVALPAVSPEQPAYITFTSGSTGEPKGIVTHHAPLVH 188
+ + E A P+ + + AY+ +TSGSTG PKG+ H PLV
Sbjct: 4187 GLDSLAIDRTEEWAGFSDTAPQVKLG-----GDNLAYVIYTSGSTGMPKGVAVSHGPLVA 4241
Query: 189 FIDWHVRQHGFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWL 248
I ++ + AD D + PL GA++ S L P +
Sbjct: 4242 HIIATGERYETSPADCELHFMSFAFDGSHEGWMHPLINGASVLIRDDS-LWLPEYTYQQM 4300
Query: 249 HQHGVSVIHLTPPLGKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQV-RAIAPNAVN 307
H+H V++ P + + A +G +R +GGDA++ Y RA+ P +
Sbjct: 4301 HRHHVTMAVFPPVYLQQLAEHAERDGNP-PKVRVYCFGGDAVAQASYDLAWRALKPTYL- 4358
Query: 308 VNFYGTTET---PQAMAFHTLDPEMDNARVPLGKGIADAQLLVINPANQLVSEGETGEIL 364
N YG TET P DP P+G + + V++ L G GE+
Sbjct: 4359 FNGYGPTETVVTPLLWKARKGDP-CGAVYAPIGTLLGNRSGYVLDAQLNLQPIGVAGELY 4417
Query: 365 IRSPYLSRGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVK 424
+ ++RGY + P LT +F+ +PF R YR+GDL DG +LG QVK
Sbjct: 4418 LGGEGVARGYLERPALTAERFVPDPF-GKPGSRVYRSGDLTRGRPDGGVDYLGSVAHQVK 4476
Query: 425 IRGHRIELAEIENAICRHPHIGQCVVLTNHEGASTRLVAYCVAQQAIRADE------LRQ 478
IRG RIEL EIE + ++G+ VV+ + +LVAY V + ADE LR+
Sbjct: 4477 IRGFRIELGEIEARLREQDNVGETVVVAHEGPTGKQLVAYVVPADTLLADETEFRDSLRR 4536
Query: 479 ALSGQLPDYMVPALFVFLDALPLTPNAKVDKRALP----AAFDDSINPPLSPLAEKLSTA 534
AL LPDYMVP F+FL +PLTPN K+D++ LP + + P + L ++++
Sbjct: 4537 ALKTHLPDYMVPTHFMFLAQMPLTPNGKLDRKGLPEPDASLLQQAYVAPETELEQQIAAI 4596
Query: 535 WARILQVPRLDARLSFVELGGDSLSFVQASRVLEALIG 572
WA +L++P++ +F E+GG SL +Q + ++A +G
Sbjct: 4597 WADVLRLPQVGLNDNFFEVGGHSLLAIQITSRVQAELG 4634